Analysis of interatomic Contacts of Structural Units in PDB entry:
8B1N


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8B1N entry

There are 2 chains in PDB entry 8B1N (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY -2GLU 430
B
 HIS 0GLN 429
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 8B1N. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
10 18Right-handed alpha
Helix 2
AA2
A
20 29Right-handed alpha
Helix 3
AA3
A
40 43Right-handed 310
Helix 4
AA4
A
64 79Right-handed alpha
Helix 5
AA5
A
94 103Right-handed alpha
Helix 6
AA6
A
118 126Right-handed alpha
Helix 7
AA7
A
140 153Right-handed alpha
Helix 8
AA8
A
192 198Right-handed alpha
Helix 9
AA9
A
199 219Right-handed alpha
Helix 10
AB1
A
219 226Right-handed alpha
Helix 11
AB2
A
229 241Right-handed alpha
Helix 12
AB3
A
271 285Right-handed alpha
Helix 13
AB4
A
296 312Right-handed alpha
Helix 14
AB5
A
314 319Right-handed alpha
Helix 15
AB6
A
319 327Right-handed alpha
Helix 16
AB7
A
334 347Right-handed alpha
Helix 17
AB8
A
366 372Right-handed alpha
Helix 18
AB9
A
388 395Right-handed alpha
Helix 19
AC1
A
412 430Right-handed alpha
Helix 20
AC2
B
10 18Right-handed alpha
Helix 21
AC3
B
20 29Right-handed alpha
Helix 22
AC4
B
40 43Right-handed 310
Helix 23
AC5
B
64 77Right-handed alpha
Helix 24
AC6
B
94 103Right-handed alpha
Helix 25
AC7
B
118 126Right-handed alpha
Helix 26
AC8
B
140 153Right-handed alpha
Helix 27
AC9
B
192 198Right-handed alpha
Helix 28
AD1
B
199 219Right-handed alpha
Helix 29
AD2
B
219 226Right-handed alpha
Helix 30
AD3
B
229 240Right-handed alpha
Helix 31
AD4
B
271 285Right-handed alpha
Helix 32
AD5
B
296 312Right-handed alpha
Helix 33
AD6
B
334 347Right-handed alpha
Helix 34
AD7
B
365 373Right-handed alpha
Helix 35
AD8
B
388 395Right-handed alpha
Helix 36
AD9
B
412 429Right-handed alpha
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There are 10 sheets in PDB entry 8B1N. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
32 38first strand
Strand 2
A
2 8parallel
Strand 3
A
106 110parallel
Strand 4
A
82 86parallel
Strand 5
A
128 131parallel
Strand 6
A
91 92parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
51 53first strand
Strand 2
A
61 63anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
185 186first strand
Strand 2
A
189 190anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
329 332first strand
Strand 2
A
289 293parallel
Strand 3
A
249 254parallel
Strand 4
A
377 381parallel
Strand 5
A
351 354parallel
Strand 6
A
397 398parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
258 259first strand
Strand 2
A
265 266anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
32 38first strand
Strand 2
B
2 8parallel
Strand 3
B
106 110parallel
Strand 4
B
82 86parallel
Strand 5
B
128 131parallel
Strand 6
B
91 92parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
51 53first strand
Strand 2
B
61 63anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
185 186first strand
Strand 2
B
189 190anti-parallel
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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
329 332first strand
Strand 2
B
289 293parallel
Strand 3
B
249 254parallel
Strand 4
B
377 381parallel
Strand 5
B
351 354parallel
Strand 6
B
397 398parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
258 259first strand
Strand 2
B
265 266anti-parallel
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