Analysis of interatomic Contacts of Structural Units in PDB entry:
8B2N


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8B2N entry

There are 4 chains in PDB entry 8B2N (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 106GLY 263
B
 SER 27ASN 118
C
 GLY 106GLY 263
D
 ASP 24ASN 118
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 8B2N. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
126 143Right-handed alpha
Helix 2
AA2
A
212 224Right-handed alpha
Helix 3
AA3
A
251 263Right-handed alpha
Helix 4
AA4
B
75 79Right-handed 310
Helix 5
AA5
C
126 143Right-handed alpha
Helix 6
AA6
C
211 224Right-handed alpha
Helix 7
AA7
C
251 263Right-handed alpha
Helix 8
AA8
D
75 79Right-handed 310
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There are 5 sheets in PDB entry 8B2N. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
148 151first strand
Strand 2
A
113 118parallel
Strand 3
A
159 164parallel
Strand 4
A
195 198parallel
Strand 5
A
182 184anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
203 204first strand
Strand 2
A
210 211parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
33 47first strand
Strand 2
B
52 58anti-parallel
Strand 3
B
66 71anti-parallel
Strand 4
B
104 116parallel
Strand 5
B
84 93anti-parallel
Strand 6
B
33 47anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
148 151first strand
Strand 2
C
113 118parallel
Strand 3
C
159 164parallel
Strand 4
C
195 198parallel
Strand 5
C
182 184anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
33 47first strand
Strand 2
D
52 58anti-parallel
Strand 3
D
66 71anti-parallel
Strand 4
D
104 116parallel
Strand 5
D
84 93anti-parallel
Strand 6
D
33 47anti-parallel
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