Analysis of interatomic Contacts of Structural Units in PDB entry:
8B5U


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8B5U entry

There is 1 chain in PDB entry 8B5U (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU -5VAL 229
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 8B5U. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
11 24Right-handed alpha
Helix 2
AA2
A
51 63Right-handed alpha
Helix 3
AA3
A
87 113Right-handed alpha
Helix 4
AA4
A
125 130Right-handed 310
Helix 5
AA5
A
135 154Right-handed alpha
Helix 6
AA6
A
155 159Right-handed 310
Helix 7
AA7
A
175 182Right-handed alpha
Helix 8
AA8
A
192 205Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 8B5U.

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
27 30first strand
Strand 2
A
3 7parallel
Strand 3
A
68 73parallel
Strand 4
A
114 123parallel
Strand 5
A
164 170parallel
Strand 6
A
214 221parallel
Strand 7
A
224 228anti-parallel
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