Analysis of interatomic Contacts of Structural Units in PDB entry:
8B5W


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8B5W entry

There is 1 chain in PDB entry 8B5W (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 4833PRO 5183
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 8B5W. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
4888 4896Right-handed alpha
Helix 2
AA2
A
4903 4908Right-handed alpha
Helix 3
AA3
A
4928 4948Right-handed alpha
Helix 4
AA4
A
4953 4970Right-handed alpha
Helix 5
AA5
A
4982 5004Right-handed alpha
Helix 6
AA6
A
5006 5019Right-handed alpha
Helix 7
AA7
A
5021 5023Right-handed 310
Helix 8
AA8
A
5024 5029Right-handed alpha
Helix 9
AA9
A
5034 5046Right-handed alpha
Helix 10
AB1
A
5047 5072Right-handed alpha
Helix 11
AB2
A
5086 5089Right-handed 310
Helix 12
AB3
A
5090 5107Right-handed alpha
Helix 13
AB4
A
5118 5130Right-handed alpha
Helix 14
AB5
A
5130 5148Right-handed alpha
Helix 15
AB6
A
5154 5162Right-handed alpha
Helix 16
AB7
A
5170 5181Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 8B5W.

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4875 4887first strand
Strand 2
A
4853 4863anti-parallel
Strand 3
A
4918 4921anti-parallel
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