Analysis of interatomic Contacts of Structural Units in PDB entry:
8B6P


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8B6P entry

There are 2 chains in PDB entry 8B6P (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY -1THR 307
B
 GLY -1THR 307
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 35 helices in PDB entry 8B6P. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1 9Right-handed alpha
Helix 2
AA2
A
12 17Right-handed alpha
Helix 3
AA3
A
17 22Right-handed alpha
Helix 4
AA4
A
28 37Right-handed alpha
Helix 5
AA5
A
38 40Right-handed 310
Helix 6
AA6
A
41 44Right-handed 310
Helix 7
AA7
A
45 55Right-handed alpha
Helix 8
AA8
A
61 78Right-handed alpha
Helix 9
AA9
A
94 105Right-handed alpha
Helix 10
AB1
A
119 124Right-handed alpha
Helix 11
AB2
A
124 139Right-handed alpha
Helix 12
AB3
A
197 202Right-handed 310
Helix 13
AB4
A
204 209Right-handed alpha
Helix 14
AB5
A
233 248Right-handed alpha
Helix 15
AB6
A
259 272Right-handed alpha
Helix 16
AB7
A
290 294Right-handed 310
Helix 17
AB8
A
295 306Right-handed alpha
Helix 18
AB9
B
1 9Right-handed alpha
Helix 19
AC1
B
12 17Right-handed alpha
Helix 20
AC2
B
17 22Right-handed alpha
Helix 21
AC3
B
28 37Right-handed alpha
Helix 22
AC4
B
38 40Right-handed 310
Helix 23
AC5
B
41 44Right-handed 310
Helix 24
AC6
B
45 55Right-handed alpha
Helix 25
AC7
B
61 78Right-handed alpha
Helix 26
AC8
B
94 105Right-handed alpha
Helix 27
AC9
B
119 124Right-handed alpha
Helix 28
AD1
B
124 137Right-handed alpha
Helix 29
AD2
B
197 202Right-handed 310
Helix 30
AD3
B
204 209Right-handed alpha
Helix 31
AD4
B
233 248Right-handed alpha
Helix 32
AD5
B
259 272Right-handed alpha
Helix 33
AD6
B
290 294Right-handed 310
Helix 34
AD7
B
295 297Right-handed 310
Helix 35
AD8
B
298 306Right-handed alpha
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There are 2 sheets in PDB entry 8B6P. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
108 116first strand
Strand 2
A
82 89parallel
Strand 3
A
276 282parallel
Strand 4
A
253 258parallel
Strand 5
A
188 191parallel
Strand 6
A
214 217parallel
Strand 7
A
173 180anti-parallel
Strand 8
A
166 170anti-parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
108 116first strand
Strand 2
B
82 89parallel
Strand 3
B
276 282parallel
Strand 4
B
253 258parallel
Strand 5
B
188 191parallel
Strand 6
B
214 217parallel
Strand 7
B
173 180anti-parallel
Strand 8
B
166 170anti-parallel
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