Analysis of interatomic Contacts of Structural Units in PDB entry:
8B6Q


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8B6Q entry

There is 1 chain in PDB entry 8B6Q (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 1LEU 470
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 8B6Q. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
42 47Right-handed 310
Helix 2
AA2
A
49 53Right-handed 310
Helix 3
AA3
A
78 93Right-handed alpha
Helix 4
AA4
A
104 117Right-handed alpha
Helix 5
AA5
A
143 150Right-handed alpha
Helix 6
AA6
A
159 174Right-handed alpha
Helix 7
AA7
A
182 193Right-handed alpha
Helix 8
AA8
A
198 207Right-handed alpha
Helix 9
AA9
A
219 226Right-handed alpha
Helix 10
AB1
A
235 247Right-handed alpha
Helix 11
AB2
A
255 266Right-handed alpha
Helix 12
AB3
A
275 283Right-handed alpha
Helix 13
AB4
A
291 299Right-handed alpha
Helix 14
AB5
A
309 327Right-handed alpha
Helix 15
AB6
A
333 340Right-handed alpha
Helix 16
AB7
A
343 348Right-handed alpha
Helix 17
AB8
A
350 354Right-handed 310
Helix 18
AB9
A
359 368Right-handed alpha
Helix 19
AC1
A
369 371Right-handed 310
Helix 20
AC2
A
372 375Right-handed 310
Helix 21
AC3
A
376 385Right-handed alpha
Helix 22
AC4
A
392 407Right-handed alpha
Helix 23
AC5
A
425 436Right-handed alpha
Helix 24
AC6
A
450 455Right-handed alpha
Helix 25
AC7
A
455 468Right-handed alpha
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There are 2 sheets in PDB entry 8B6Q. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
10 15first strand
Strand 2
A
18 25anti-parallel
Strand 3
A
59 63anti-parallel
Strand 4
A
33 36parallel
Strand 5
A
98 103parallel
Strand 6
A
121 127parallel
Strand 7
A
413 420parallel
Strand 8
A
439 447parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
180 181first strand
Strand 2
A
217 218anti-parallel
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