Analysis of interatomic Contacts of Structural Units in PDB entry:
8B70


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8B70 entry

There are 2 chains in PDB entry 8B70 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 22LYS 606
B
 GLN 22LYS 606
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 52 helices in PDB entry 8B70. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
25 34Right-handed alpha
Helix 2
AA2
A
39 42Right-handed 310
Helix 3
AA3
A
43 54Right-handed alpha
Helix 4
AA4
A
55 61Right-handed 310
Helix 5
AA5
A
62 88Right-handed alpha
Helix 6
AA6
A
93 103Right-handed alpha
Helix 7
AA7
A
104 137Right-handed alpha
Helix 8
AA8
A
138 142Right-handed 310
Helix 9
AA9
A
143 161Right-handed alpha
Helix 10
AB1
A
171 195Right-handed alpha
Helix 11
AB2
A
214 226Right-handed alpha
Helix 12
AB3
A
227 229Right-handed 310
Helix 13
AB4
A
232 237Right-handed alpha
Helix 14
AB5
A
245 276Right-handed alpha
Helix 15
AB6
A
284 295Right-handed alpha
Helix 16
AB7
A
297 331Right-handed alpha
Helix 17
AB8
A
336 340Right-handed 310
Helix 18
AB9
A
347 367Right-handed alpha
Helix 19
AC1
A
369 400Right-handed alpha
Helix 20
AC2
A
403 429Right-handed alpha
Helix 21
AC3
A
429 463Right-handed alpha
Helix 22
AC4
A
484 498Right-handed alpha
Helix 23
AC5
A
509 523Right-handed alpha
Helix 24
AC6
A
539 557Right-handed alpha
Helix 25
AC7
A
574 579Right-handed 310
Helix 26
AC8
A
580 590Right-handed alpha
Helix 27
AC9
B
25 34Right-handed alpha
Helix 28
AD1
B
39 42Right-handed 310
Helix 29
AD2
B
43 54Right-handed alpha
Helix 30
AD3
B
55 61Right-handed 310
Helix 31
AD4
B
62 88Right-handed alpha
Helix 32
AD5
B
93 103Right-handed alpha
Helix 33
AD6
B
104 137Right-handed alpha
Helix 34
AD7
B
138 142Right-handed 310
Helix 35
AD8
B
143 161Right-handed alpha
Helix 36
AD9
B
171 195Right-handed alpha
Helix 37
AE1
B
214 226Right-handed alpha
Helix 38
AE2
B
227 229Right-handed 310
Helix 39
AE3
B
232 237Right-handed alpha
Helix 40
AE4
B
245 276Right-handed alpha
Helix 41
AE5
B
284 295Right-handed alpha
Helix 42
AE6
B
297 331Right-handed alpha
Helix 43
AE7
B
336 340Right-handed 310
Helix 44
AE8
B
347 367Right-handed alpha
Helix 45
AE9
B
369 400Right-handed alpha
Helix 46
AF1
B
403 429Right-handed alpha
Helix 47
AF2
B
429 463Right-handed alpha
Helix 48
AF3
B
484 498Right-handed alpha
Helix 49
AF4
B
509 523Right-handed alpha
Helix 50
AF5
B
539 557Right-handed alpha
Helix 51
AF6
B
574 579Right-handed 310
Helix 52
AF7
B
580 590Right-handed alpha
Back to top of page

There is 1 sheet (AA1) in PDB entry 8B70.

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
528 533first strand
Strand 2
A
502 507parallel
Strand 3
A
474 479parallel
Strand 4
A
560 569parallel
Strand 5
A
597 604parallel
Strand 6
B
597 604anti-parallel
Strand 7
B
560 569parallel
Strand 8
B
474 479parallel
Strand 9
B
502 507parallel
Strand 10
B
528 533parallel
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il