Analysis of interatomic Contacts of Structural Units in PDB entry:
8B71


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8B71 entry

There are 2 chains in PDB entry 8B71 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 30LYS 606
B
 LEU 30LYS 606
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 54 helices in PDB entry 8B71. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
30 40Right-handed alpha
Helix 2
AA2
A
40 53Right-handed alpha
Helix 3
AA3
A
56 61Right-handed 310
Helix 4
AA4
A
62 88Right-handed alpha
Helix 5
AA5
A
95 101Right-handed alpha
Helix 6
AA6
A
103 137Right-handed alpha
Helix 7
AA7
A
138 142Right-handed 310
Helix 8
AA8
A
143 161Right-handed alpha
Helix 9
AA9
A
167 170Right-handed 310
Helix 10
AB1
A
171 193Right-handed alpha
Helix 11
AB2
A
216 227Right-handed alpha
Helix 12
AB3
A
228 229Right-handed 310
Helix 13
AB4
A
230 231Right-handed 310
Helix 14
AB5
A
232 238Right-handed alpha
Helix 15
AB6
A
239 242Right-handed 310
Helix 16
AB7
A
245 276Right-handed alpha
Helix 17
AB8
A
284 295Right-handed alpha
Helix 18
AB9
A
297 331Right-handed alpha
Helix 19
AC1
A
336 340Right-handed 310
Helix 20
AC2
A
347 365Right-handed alpha
Helix 21
AC3
A
369 399Right-handed alpha
Helix 22
AC4
A
403 429Right-handed alpha
Helix 23
AC5
A
429 463Right-handed alpha
Helix 24
AC6
A
484 498Right-handed alpha
Helix 25
AC7
A
509 523Right-handed alpha
Helix 26
AC8
A
540 557Right-handed alpha
Helix 27
AC9
A
582 591Right-handed alpha
Helix 28
AD1
B
31 40Right-handed alpha
Helix 29
AD2
B
40 53Right-handed alpha
Helix 30
AD3
B
56 61Right-handed 310
Helix 31
AD4
B
62 88Right-handed alpha
Helix 32
AD5
B
95 101Right-handed alpha
Helix 33
AD6
B
103 137Right-handed alpha
Helix 34
AD7
B
138 142Right-handed 310
Helix 35
AD8
B
143 161Right-handed alpha
Helix 36
AD9
B
167 170Right-handed 310
Helix 37
AE1
B
171 193Right-handed alpha
Helix 38
AE2
B
216 227Right-handed alpha
Helix 39
AE3
B
228 229Right-handed 310
Helix 40
AE4
B
230 231Right-handed 310
Helix 41
AE5
B
232 238Right-handed alpha
Helix 42
AE6
B
239 242Right-handed 310
Helix 43
AE7
B
245 276Right-handed alpha
Helix 44
AE8
B
284 295Right-handed alpha
Helix 45
AE9
B
297 331Right-handed alpha
Helix 46
AF1
B
336 340Right-handed 310
Helix 47
AF2
B
347 365Right-handed alpha
Helix 48
AF3
B
369 399Right-handed alpha
Helix 49
AF4
B
403 429Right-handed alpha
Helix 50
AF5
B
429 463Right-handed alpha
Helix 51
AF6
B
484 498Right-handed alpha
Helix 52
AF7
B
509 523Right-handed alpha
Helix 53
AF8
B
540 557Right-handed alpha
Helix 54
AF9
B
582 591Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 8B71.

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
529 533first strand
Strand 2
A
501 507parallel
Strand 3
A
474 479parallel
Strand 4
A
560 564parallel
Strand 5
A
597 600parallel
Strand 6
B
597 600anti-parallel
Strand 7
B
560 564parallel
Strand 8
B
474 479parallel
Strand 9
B
501 507parallel
Strand 10
B
529 533parallel
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