Analysis of interatomic Contacts of Structural Units in PDB entry:
8B73


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8B73 entry

There are 2 chains in PDB entry 8B73 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 CYS 9ALA 413
B
 CYS 9ALA 413
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 34 helices in PDB entry 8B73. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
10 12Right-handed 310
Helix 2
AA2
A
51 57Right-handed alpha
Helix 3
AA3
A
61 77Right-handed alpha
Helix 4
AA4
A
87 92Right-handed alpha
Helix 5
AA5
A
99 113Right-handed alpha
Helix 6
AA6
A
129 135Right-handed 310
Helix 7
AA7
A
136 155Right-handed alpha
Helix 8
AA8
A
170 174Right-handed 310
Helix 9
AA9
A
179 189Right-handed alpha
Helix 10
AB1
A
189 205Right-handed alpha
Helix 11
AB2
A
218 231Right-handed alpha
Helix 12
AB3
A
250 262Right-handed alpha
Helix 13
AB4
A
263 265Right-handed 310
Helix 14
AB5
A
287 291Right-handed 310
Helix 15
AB6
A
299 319Right-handed alpha
Helix 16
AB7
A
335 339Right-handed 310
Helix 17
AB8
A
351 363Right-handed alpha
Helix 18
AB9
B
10 12Right-handed 310
Helix 19
AC1
B
51 57Right-handed alpha
Helix 20
AC2
B
61 77Right-handed alpha
Helix 21
AC3
B
87 92Right-handed alpha
Helix 22
AC4
B
99 113Right-handed alpha
Helix 23
AC5
B
129 135Right-handed 310
Helix 24
AC6
B
136 155Right-handed alpha
Helix 25
AC7
B
170 174Right-handed 310
Helix 26
AC8
B
179 189Right-handed alpha
Helix 27
AC9
B
189 205Right-handed alpha
Helix 28
AD1
B
218 231Right-handed alpha
Helix 29
AD2
B
250 262Right-handed alpha
Helix 30
AD3
B
263 265Right-handed 310
Helix 31
AD4
B
287 291Right-handed 310
Helix 32
AD5
B
299 319Right-handed alpha
Helix 33
AD6
B
335 339Right-handed 310
Helix 34
AD7
B
351 363Right-handed alpha
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There are 6 sheets in PDB entry 8B73. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
379 385first strand
Strand 2
A
14 21anti-parallel
Strand 3
A
409 411parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
370 373first strand
Strand 2
A
33 41anti-parallel
Strand 3
A
387 393anti-parallel
Strand 4
A
396 402anti-parallel
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There are 9 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
44 48first strand
Strand 2
A
81 85parallel
Strand 3
A
116 120parallel
Strand 4
A
161 166parallel
Strand 5
A
209 214parallel
Strand 6
A
237 243parallel
Strand 7
A
268 274parallel
Strand 8
A
323 328parallel
Strand 9
A
44 48parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
379 385first strand
Strand 2
B
14 21anti-parallel
Strand 3
B
409 411parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
370 373first strand
Strand 2
B
33 41anti-parallel
Strand 3
B
387 393anti-parallel
Strand 4
B
396 402anti-parallel
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There are 9 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
44 48first strand
Strand 2
B
81 85parallel
Strand 3
B
116 120parallel
Strand 4
B
161 166parallel
Strand 5
B
209 214parallel
Strand 6
B
237 243parallel
Strand 7
B
268 274parallel
Strand 8
B
323 328parallel
Strand 9
B
44 48parallel
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