Analysis of interatomic Contacts of Structural Units in PDB entry:
8B74


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8B74 entry

There is 1 chain in PDB entry 8B74 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1SER 463
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 8B74. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
6 10Right-handed 310
Helix 2
AA2
A
13 28Right-handed alpha
Helix 3
AA3
A
35 44Right-handed alpha
Helix 4
AA4
A
48 56Right-handed alpha
Helix 5
AA5
A
64 69Right-handed alpha
Helix 6
AA6
A
82 105Right-handed alpha
Helix 7
AA7
A
117 123Right-handed 310
Helix 8
AA8
A
127 134Right-handed alpha
Helix 9
AA9
A
138 142Right-handed 310
Helix 10
AB1
A
151 155Right-handed 310
Helix 11
AB2
A
165 170Right-handed 310
Helix 12
AB3
A
171 176Right-handed alpha
Helix 13
AB4
A
204 209Right-handed alpha
Helix 14
AB5
A
210 219Right-handed alpha
Helix 15
AB6
A
220 224Right-handed 310
Helix 16
AB7
A
227 231Right-handed 310
Helix 17
AB8
A
233 250Right-handed alpha
Helix 18
AB9
A
259 264Right-handed alpha
Helix 19
AC1
A
282 285Right-handed 310
Helix 20
AC2
A
287 290Right-handed 310
Helix 21
AC3
A
398 403Right-handed alpha
Helix 22
AC4
A
420 429Right-handed alpha
Helix 23
AC5
A
434 437Right-handed 310
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There are 5 sheets in PDB entry 8B74. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 4first strand
Strand 2
A
292 294parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
266 270first strand
Strand 2
A
276 280anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
323 324first strand
Strand 2
A
453 462anti-parallel
Strand 3
A
317 318anti-parallel
Strand 4
A
335 336anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
323 324first strand
Strand 2
A
453 462anti-parallel
Strand 3
A
358 367anti-parallel
Strand 4
A
414 419anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
332 333first strand
Strand 2
A
439 444anti-parallel
Strand 3
A
373 378anti-parallel
Strand 4
A
390 394anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il