Analysis of interatomic Contacts of Structural Units in PDB entry:
8B77


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8B77 entry

There are 3 chains in PDB entry 8B77 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 31THR 1186
P
 T 1 T 10
T
 T 2 A 16
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 47 helices in PDB entry 8B77. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
32 50Right-handed alpha
Helix 2
AA2
A
65 69Right-handed 310
Helix 3
AA3
A
148 160Right-handed alpha
Helix 4
AA4
A
161 163Right-handed 310
Helix 5
AA5
A
195 213Right-handed alpha
Helix 6
AA6
A
234 237Right-handed 310
Helix 7
AA7
A
248 258Right-handed alpha
Helix 8
AA8
A
354 370Right-handed alpha
Helix 9
AA9
A
382 393Right-handed alpha
Helix 10
AB1
A
397 403Right-handed alpha
Helix 11
AB2
A
422 429Right-handed alpha
Helix 12
AB3
A
433 437Right-handed 310
Helix 13
AB4
A
438 446Right-handed alpha
Helix 14
AB5
A
455 459Right-handed 310
Helix 15
AB6
A
460 464Right-handed 310
Helix 16
AB7
A
466 488Right-handed alpha
Helix 17
AB8
A
488 497Right-handed alpha
Helix 18
AB9
A
503 510Right-handed alpha
Helix 19
AC1
A
511 527Right-handed alpha
Helix 20
AC2
A
577 587Right-handed alpha
Helix 21
AC3
A
587 598Right-handed alpha
Helix 22
AC4
A
603 607Right-handed 310
Helix 23
AC5
A
609 627Right-handed alpha
Helix 24
AC6
A
643 652Right-handed alpha
Helix 25
AC7
A
655 657Right-handed 310
Helix 26
AC8
A
665 670Right-handed alpha
Helix 27
AC9
A
693 704Right-handed alpha
Helix 28
AD1
A
727 748Right-handed alpha
Helix 29
AD2
A
768 798Right-handed alpha
Helix 30
AD3
A
802 833Right-handed alpha
Helix 31
AD4
A
834 836Right-handed 310
Helix 32
AD5
A
843 869Right-handed alpha
Helix 33
AD6
A
905 918Right-handed alpha
Helix 34
AD7
A
992 1003Right-handed alpha
Helix 35
AD8
A
1004 1006Right-handed 310
Helix 36
AD9
A
1011 1032Right-handed alpha
Helix 37
AE1
A
1038 1047Right-handed alpha
Helix 38
AE2
A
1055 1059Right-handed 310
Helix 39
AE3
A
1064 1078Right-handed alpha
Helix 40
AE4
A
1079 1082Right-handed 310
Helix 41
AE5
A
1101 1104Right-handed 310
Helix 42
AE6
A
1110 1114Right-handed 310
Helix 43
AE7
A
1115 1128Right-handed alpha
Helix 44
AE8
A
1136 1141Right-handed alpha
Helix 45
AE9
A
1142 1158Right-handed alpha
Helix 46
AF1
A
1158 1165Right-handed alpha
Helix 47
AF2
A
1177 1185Right-handed alpha
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There are 11 sheets in PDB entry 8B77. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
128 134first strand
Strand 2
A
114 122anti-parallel
Strand 3
A
75 87anti-parallel
Strand 4
A
264 267anti-parallel
Strand 5
A
272 274anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
166 172first strand
Strand 2
A
186 192anti-parallel
Strand 3
A
138 143anti-parallel
Strand 4
A
239 243anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
335 336first strand
Strand 2
A
346 352anti-parallel
Strand 3
A
318 324parallel
Strand 4
A
308 315anti-parallel
Strand 5
A
286 293anti-parallel
Strand 6
A
373 376parallel
Strand 7
A
418 421parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
404 406first strand
Strand 2
A
412 414anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
542 543first strand
Strand 2
A
546 553anti-parallel
Strand 3
A
681 689anti-parallel
Strand 4
A
752 762anti-parallel
Strand 5
A
659 660anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
558 560first strand
Strand 2
A
870 875anti-parallel
Strand 3
A
878 884anti-parallel
Strand 4
A
634 641anti-parallel
Strand 5
A
944 950anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
564 567first strand
Strand 2
A
952 955anti-parallel
Strand 3
A
969 972anti-parallel
Strand 4
A
978 982anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
572 575first strand
Strand 2
A
629 632anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
890 894first strand
Strand 2
A
900 904anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
920 928first strand
Strand 2
A
933 939anti-parallel
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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1048 1052first strand
Strand 2
A
1087 1093anti-parallel
Strand 3
A
1106 1108anti-parallel
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