Analysis of interatomic Contacts of Structural Units in PDB entry:
8B7S


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8B7S entry

There is 1 chain in PDB entry 8B7S (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 2GLU 537
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 8B7S. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
14 25Right-handed alpha
Helix 2
AA2
A
70 74Right-handed 310
Helix 3
AA3
A
101 111Right-handed alpha
Helix 4
AA4
A
117 132Right-handed alpha
Helix 5
AA5
A
155 168Right-handed alpha
Helix 6
AA6
A
173 177Right-handed 310
Helix 7
AA7
A
198 205Right-handed alpha
Helix 8
AA8
A
255 267Right-handed alpha
Helix 9
AA9
A
271 278Right-handed alpha
Helix 10
AB1
A
415 435Right-handed alpha
Helix 11
AB2
A
437 440Right-handed 310
Helix 12
AB3
A
454 466Right-handed alpha
Helix 13
AB4
A
502 506Right-handed 310
Helix 14
AB5
A
513 535Right-handed alpha
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There are 8 sheets in PDB entry 8B7S. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
213 216first strand
Strand 2
A
32 35parallel
Strand 3
A
5 11parallel
Strand 4
A
241 253parallel
Strand 5
A
230 238anti-parallel
Strand 6
A
220 227anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
213 216first strand
Strand 2
A
32 35parallel
Strand 3
A
5 11parallel
Strand 4
A
241 253parallel
Strand 5
A
498 500parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
65 66first strand
Strand 2
A
79 80anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
97 99first strand
Strand 2
A
193 195anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
182 185first strand
Strand 2
A
341 345anti-parallel
Strand 3
A
356 361anti-parallel
Strand 4
A
379 386anti-parallel
Strand 5
A
297 305anti-parallel
Strand 6
A
442 445anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
182 185first strand
Strand 2
A
341 345anti-parallel
Strand 3
A
356 361anti-parallel
Strand 4
A
379 386anti-parallel
Strand 5
A
297 305anti-parallel
Strand 6
A
467 468anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
269 270first strand
Strand 2
A
284 285parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
394 396first strand
Strand 2
A
407 409anti-parallel
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