Analysis of interatomic Contacts of Structural Units in PDB entry:
8B92


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8B92 entry

There are 4 chains in PDB entry 8B92 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 201GLU 460
B
 GLN 203GLU 460
C
 ASN 2347MET 2359
D
 GLY 2349MET 2359
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 8B92. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
205 226Right-handed alpha
Helix 2
AA2
A
229 238Right-handed alpha
Helix 3
AA3
A
251 262Right-handed alpha
Helix 4
AA4
A
276 302Right-handed alpha
Helix 5
AA5
A
305 309Right-handed 310
Helix 6
AA6
A
310 333Right-handed alpha
Helix 7
AA7
A
350 355Right-handed alpha
Helix 8
AA8
A
359 363Right-handed 310
Helix 9
AA9
A
364 376Right-handed alpha
Helix 10
AB1
A
380 393Right-handed alpha
Helix 11
AB2
A
402 425Right-handed alpha
Helix 12
AB3
A
430 460Right-handed alpha
Helix 13
AB4
B
205 226Right-handed alpha
Helix 14
AB5
B
229 238Right-handed alpha
Helix 15
AB6
B
251 258Right-handed alpha
Helix 16
AB7
B
276 302Right-handed alpha
Helix 17
AB8
B
305 309Right-handed 310
Helix 18
AB9
B
310 332Right-handed alpha
Helix 19
AC1
B
342 344Right-handed 310
Helix 20
AC2
B
350 355Right-handed alpha
Helix 21
AC3
B
359 363Right-handed 310
Helix 22
AC4
B
364 376Right-handed alpha
Helix 23
AC5
B
380 393Right-handed alpha
Helix 24
AC6
B
402 425Right-handed alpha
Helix 25
AC7
B
430 460Right-handed alpha
Helix 26
AC8
C
2348 2359Right-handed alpha
Helix 27
AC9
D
2350 2359Right-handed alpha
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There are 2 sheets in PDB entry 8B92. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
247 249first strand
Strand 2
A
346 349parallel
Strand 3
A
338 341anti-parallel
Strand 4
A
334 335anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
247 249first strand
Strand 2
B
346 349parallel
Strand 3
B
338 341anti-parallel
Strand 4
B
334 335anti-parallel
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