Analysis of interatomic Contacts of Structural Units in PDB entry:
8BAL

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8BAL entry

There are 5 chains in PDB entry 8BAL (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLN 32	ASN 380
C	GLN 32	ASN 380
D	GLN 32	ARG 374
E	GLN 32	ASN 380
F	PHE 33	ASN 380

There are 79 helices in PDB entry 8BAL. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	49	51	Right-handed 310
Helix 2	AA2	A	52	62	Right-handed alpha
Helix 3	AA3	A	62	68	Right-handed alpha
Helix 4	AA4	A	85	89	Right-handed 310
Helix 5	AA5	A	95	108	Right-handed alpha
Helix 6	AA6	A	131	136	Right-handed alpha
Helix 7	AA7	A	137	140	Right-handed 310
Helix 8	AA8	A	171	187	Right-handed alpha
Helix 9	AA9	A	215	232	Right-handed alpha
Helix 10	AB1	A	241	244	Right-handed 310
Helix 11	AB2	A	261	267	Right-handed 310
Helix 12	AB3	A	284	293	Right-handed alpha
Helix 13	AB4	A	304	321	Right-handed alpha
Helix 14	AB5	A	327	333	Right-handed alpha
Helix 15	AB6	A	344	353	Right-handed alpha
Helix 16	AB7	A	360	377	Right-handed alpha
Helix 17	AB8	C	49	51	Right-handed 310
Helix 18	AB9	C	52	63	Right-handed alpha
Helix 19	AC1	C	63	68	Right-handed alpha
Helix 20	AC2	C	101	108	Right-handed alpha
Helix 21	AC3	C	131	136	Right-handed alpha
Helix 22	AC4	C	171	187	Right-handed alpha
Helix 23	AC5	C	213	232	Right-handed alpha
Helix 24	AC6	C	241	244	Right-handed 310
Helix 25	AC7	C	245	250	Right-handed alpha
Helix 26	AC8	C	262	267	Right-handed 310
Helix 27	AC9	C	284	293	Right-handed alpha
Helix 28	AD1	C	303	320	Right-handed alpha
Helix 29	AD2	C	321	323	Right-handed 310
Helix 30	AD3	C	324	326	Right-handed 310
Helix 31	AD4	C	327	334	Right-handed alpha
Helix 32	AD5	C	344	353	Right-handed alpha
Helix 33	AD6	C	362	380	Right-handed alpha
Helix 34	AD7	D	49	51	Right-handed 310
Helix 35	AD8	D	52	63	Right-handed alpha
Helix 36	AD9	D	63	68	Right-handed alpha
Helix 37	AE1	D	95	110	Right-handed alpha
Helix 38	AE2	D	130	136	Right-handed alpha
Helix 39	AE3	D	137	140	Right-handed 310
Helix 40	AE4	D	179	187	Right-handed alpha
Helix 41	AE5	D	214	230	Right-handed alpha
Helix 42	AE6	D	231	233	Right-handed 310
Helix 43	AE7	D	241	244	Right-handed 310
Helix 44	AE8	D	261	268	Right-handed 310
Helix 45	AE9	D	286	293	Right-handed alpha
Helix 46	AF1	D	303	319	Right-handed alpha
Helix 47	AF2	D	327	334	Right-handed alpha
Helix 48	AF3	D	344	353	Right-handed alpha
Helix 49	AF4	D	360	374	Right-handed alpha
Helix 50	AF5	E	49	53	Right-handed 310
Helix 51	AF6	E	54	68	Right-handed alpha
Helix 52	AF7	E	85	89	Right-handed 310
Helix 53	AF8	E	98	109	Right-handed alpha
Helix 54	AF9	E	175	180	Right-handed alpha
Helix 55	AG1	E	215	232	Right-handed alpha
Helix 56	AG2	E	241	244	Right-handed 310
Helix 57	AG3	E	284	292	Right-handed alpha
Helix 58	AG4	E	303	324	Right-handed alpha
Helix 59	AG5	E	327	333	Right-handed alpha
Helix 60	AG6	E	345	354	Right-handed alpha
Helix 61	AG7	E	355	358	Right-handed 310
Helix 62	AG8	E	360	378	Right-handed alpha
Helix 63	AG9	F	49	51	Right-handed 310
Helix 64	AH1	F	52	61	Right-handed alpha
Helix 65	AH2	F	62	68	Right-handed alpha
Helix 66	AH3	F	85	89	Right-handed 310
Helix 67	AH4	F	95	109	Right-handed alpha
Helix 68	AH5	F	130	135	Right-handed alpha
Helix 69	AH6	F	171	181	Right-handed alpha
Helix 70	AH7	F	213	230	Right-handed alpha
Helix 71	AH8	F	231	233	Right-handed 310
Helix 72	AH9	F	240	244	Right-handed 310
Helix 73	AI1	F	263	267	Right-handed 310
Helix 74	AI2	F	303	320	Right-handed alpha
Helix 75	AI3	F	321	323	Right-handed 310
Helix 76	AI4	F	324	326	Right-handed 310
Helix 77	AI5	F	327	333	Right-handed alpha
Helix 78	AI6	F	344	354	Right-handed alpha
Helix 79	AI7	F	362	377	Right-handed alpha

There are 10 sheets in PDB entry 8BAL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	112	116	first strand
Strand 2	A	71	75	parallel
Strand 3	A	42	46	parallel
Strand 4	A	338	340	parallel
Strand 5	A	299	300	parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	190	192	first strand
Strand 2	A	235	239	parallel
Strand 3	A	273	275	parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	44	46	first strand
Strand 2	C	71	75	parallel
Strand 3	C	112	116	parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	190	194	first strand
Strand 2	C	235	239	parallel
Strand 3	C	272	275	parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	112	116	first strand
Strand 2	D	71	75	parallel
Strand 3	D	40	46	parallel
Strand 4	D	336	340	parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	191	192	first strand
Strand 2	D	236	239	parallel
Strand 3	D	273	277	parallel
Strand 4	D	295	299	parallel

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There are 9 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	40	45	first strand
Strand 2	E	71	75	parallel
Strand 3	E	112	116	parallel
Strand 4	E	190	192	parallel
Strand 5	E	235	239	parallel
Strand 6	E	273	277	parallel
Strand 7	E	295	300	parallel
Strand 8	E	336	339	parallel
Strand 9	E	40	45	parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	112	116	first strand
Strand 2	F	71	75	parallel
Strand 3	F	41	46	parallel
Strand 4	F	337	339	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	190	192	first strand
Strand 2	F	235	237	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	275	277	first strand
Strand 2	F	297	299	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8BAL

Analysis of interatomic Contacts of Structural Units in PDB entry:
8BAL