Analysis of interatomic Contacts of Structural Units in PDB entry:
8BAS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8BAS entry

There are 2 chains in PDB entry 8BAS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 0GLY 207
C
 A 1 C 5
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 8BAS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 11Right-handed alpha
Helix 2
AA2
A
23 31Right-handed alpha
Helix 3
AA3
A
34 41Right-handed alpha
Helix 4
AA4
A
68 79Right-handed alpha
Helix 5
AA5
A
91 96Right-handed alpha
Helix 6
AA6
A
114 118Right-handed 310
Helix 7
AA7
A
119 127Right-handed alpha
Helix 8
AA8
A
160 162Right-handed 310
Helix 9
AA9
A
171 182Right-handed alpha
Helix 10
AB1
A
201 206Right-handed alpha
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There are 2 sheets in PDB entry 8BAS. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
98 101first strand
Strand 2
A
152 155anti-parallel
Strand 3
A
60 64anti-parallel
Strand 4
A
15 20anti-parallel
Strand 5
A
83 88anti-parallel
Strand 6
A
164 169anti-parallel
Strand 7
A
187 189parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
131 132first strand
Strand 2
A
135 136anti-parallel
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