Analysis of interatomic Contacts of Structural Units in PDB entry:
8BCZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8BCZ entry

There are 9 chains in PDB entry 8BCZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
R
 THR 333GLY 526
H
 VAL 2SER 119
L
 ALA 1LYS 107
C
 GLN 1SER 121
D
 ASP 1LYS 107
E
 GLU 1SER 121
F
 ASP 1LYS 108
A
 VAL 2SER 119
B
 ALA 1LYS 106
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 8BCZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
R
337 343Right-handed alpha
Helix 2
AA2
R
364 369Right-handed alpha
Helix 3
AA3
R
383 387Right-handed 310
Helix 4
AA4
R
405 410Right-handed 310
Helix 5
AA5
R
416 422Right-handed alpha
Helix 6
AA6
R
502 505Right-handed 310
Helix 7
AA7
H
28 32Right-handed 310
Helix 8
AA8
H
86 90Right-handed 310
Helix 9
AA9
L
79 83Right-handed 310
Helix 10
AB1
C
28 32Right-handed 310
Helix 11
AB2
C
87 91Right-handed 310
Helix 12
AB3
D
79 83Right-handed 310
Helix 13
AB4
E
28 32Right-handed 310
Helix 14
AB5
E
87 91Right-handed 310
Helix 15
AB6
F
79 83Right-handed 310
Helix 16
AB7
A
63 66Right-handed 310
Helix 17
AB8
A
88 92Right-handed 310
Helix 18
AB9
B
79 83Right-handed 310
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There are 27 sheets in PDB entry 8BCZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
R
334 335first strand
Strand 2
R
361 362parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
R
354 358first strand
Strand 2
R
394 403anti-parallel
Strand 3
R
507 516anti-parallel
Strand 4
R
431 437anti-parallel
Strand 5
R
376 380anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
R
452 454first strand
Strand 2
R
492 494anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
R
473 474first strand
Strand 2
R
488 489anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
3 7first strand
Strand 2
H
18 25anti-parallel
Strand 3
H
77 82anti-parallel
Strand 4
H
67 72anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
10 12first strand
Strand 2
H
113 117parallel
Strand 3
H
91 97anti-parallel
Strand 4
H
34 39anti-parallel
Strand 5
H
45 51anti-parallel
Strand 6
H
57 59anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
10 12first strand
Strand 2
H
113 117parallel
Strand 3
H
91 97anti-parallel
Strand 4
H
108 109anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
4 7first strand
Strand 2
L
19 25anti-parallel
Strand 3
L
70 75anti-parallel
Strand 4
L
62 65anti-parallel
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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
53 54first strand
Strand 2
L
45 49anti-parallel
Strand 3
L
33 38anti-parallel
Strand 4
L
85 90anti-parallel
Strand 5
L
97 98anti-parallel
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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
53 54first strand
Strand 2
L
45 49anti-parallel
Strand 3
L
33 38anti-parallel
Strand 4
L
85 90anti-parallel
Strand 5
L
102 103anti-parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
3 7first strand
Strand 2
C
18 25anti-parallel
Strand 3
C
78 83anti-parallel
Strand 4
C
68 73anti-parallel
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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
11 12first strand
Strand 2
C
115 119parallel
Strand 3
C
92 98anti-parallel
Strand 4
C
34 39anti-parallel
Strand 5
C
45 51anti-parallel
Strand 6
C
58 60anti-parallel
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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
4 7first strand
Strand 2
D
19 25anti-parallel
Strand 3
D
70 75anti-parallel
Strand 4
D
62 65anti-parallel
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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
10 13first strand
Strand 2
D
103 106parallel
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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
53 54first strand
Strand 2
D
45 49anti-parallel
Strand 3
D
33 38anti-parallel
Strand 4
D
85 90anti-parallel
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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
3 7first strand
Strand 2
E
17 25anti-parallel
Strand 3
E
78 84anti-parallel
Strand 4
E
68 73anti-parallel
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There are 6 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
10 12first strand
Strand 2
E
115 119parallel
Strand 3
E
92 99anti-parallel
Strand 4
E
34 39anti-parallel
Strand 5
E
45 51anti-parallel
Strand 6
E
58 60anti-parallel
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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
10 12first strand
Strand 2
E
115 119parallel
Strand 3
E
92 99anti-parallel
Strand 4
E
108 111anti-parallel
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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
4 7first strand
Strand 2
F
19 25anti-parallel
Strand 3
F
70 75anti-parallel
Strand 4
F
62 67anti-parallel
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There are 6 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
10 13first strand
Strand 2
F
103 107parallel
Strand 3
F
85 90anti-parallel
Strand 4
F
33 38anti-parallel
Strand 5
F
45 49anti-parallel
Strand 6
F
53 54anti-parallel
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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
10 13first strand
Strand 2
F
103 107parallel
Strand 3
F
85 90anti-parallel
Strand 4
F
98 99anti-parallel
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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3 7first strand
Strand 2
A
18 25anti-parallel
Strand 3
A
79 84anti-parallel
Strand 4
A
69 74anti-parallel
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There are 5 strands in AC5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
59 61first strand
Strand 2
A
48 54anti-parallel
Strand 3
A
35 41anti-parallel
Strand 4
A
93 99anti-parallel
Strand 5
A
108 109anti-parallel
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There are 5 strands in AC6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
59 61first strand
Strand 2
A
48 54anti-parallel
Strand 3
A
35 41anti-parallel
Strand 4
A
93 99anti-parallel
Strand 5
A
113 115anti-parallel
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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
4 7first strand
Strand 2
B
19 25anti-parallel
Strand 3
B
70 75anti-parallel
Strand 4
B
62 67anti-parallel
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There are 6 strands in AC8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
10 13first strand
Strand 2
B
101 105parallel
Strand 3
B
85 90anti-parallel
Strand 4
B
33 38anti-parallel
Strand 5
B
45 49anti-parallel
Strand 6
B
53 54anti-parallel
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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
10 13first strand
Strand 2
B
101 105parallel
Strand 3
B
85 90anti-parallel
Strand 4
B
96 97anti-parallel
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