Analysis of interatomic Contacts of Structural Units in PDB entry:
8BDY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8BDY entry

There is 1 chain in PDB entry 8BDY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 884ALA 1087
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 7 helices in PDB entry 8BDY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
928 932Right-handed 310
Helix 2
AA2
A
944 949Right-handed alpha
Helix 3
AA3
A
959 976Right-handed alpha
Helix 4
AA4
A
979 983Right-handed 310
Helix 5
AA5
A
1002 1010Right-handed alpha
Helix 6
AA6
A
1020 1044Right-handed alpha
Helix 7
AA7
A
1060 1081Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 8BDY.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
900 901first strand
Strand 2
A
908 909anti-parallel
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