Analysis of interatomic Contacts of Structural Units in PDB entry:
8BFI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8BFI entry

There are 3 chains in PDB entry 8BFI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY -3VAL 662
B
 ASP 25LYS 713
C
 MET 61LEU 497
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 91 helices in PDB entry 8BFI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
8 19Right-handed alpha
Helix 2
AA2
A
24 39Right-handed alpha
Helix 3
AA3
A
39 53Right-handed alpha
Helix 4
AA4
A
70 82Right-handed alpha
Helix 5
AA5
A
86 97Right-handed alpha
Helix 6
AA6
A
110 119Right-handed alpha
Helix 7
AA7
A
122 134Right-handed alpha
Helix 8
AA8
A
138 162Right-handed alpha
Helix 9
AA9
A
177 189Right-handed alpha
Helix 10
AB1
A
199 214Right-handed alpha
Helix 11
AB2
A
223 228Right-handed alpha
Helix 12
AB3
A
256 262Right-handed alpha
Helix 13
AB4
A
271 281Right-handed alpha
Helix 14
AB5
A
287 300Right-handed alpha
Helix 15
AB6
A
353 360Right-handed alpha
Helix 16
AB7
A
370 386Right-handed alpha
Helix 17
AB8
A
391 397Right-handed alpha
Helix 18
AB9
A
401 415Right-handed alpha
Helix 19
AC1
A
446 449Right-handed 310
Helix 20
AC2
A
450 460Right-handed alpha
Helix 21
AC3
A
465 473Right-handed alpha
Helix 22
AC4
A
473 480Right-handed alpha
Helix 23
AC5
A
480 491Right-handed alpha
Helix 24
AC6
A
496 507Right-handed alpha
Helix 25
AC7
A
508 512Right-handed 310
Helix 26
AC8
A
516 526Right-handed alpha
Helix 27
AC9
A
531 548Right-handed alpha
Helix 28
AD1
A
553 568Right-handed alpha
Helix 29
AD2
A
569 575Right-handed alpha
Helix 30
AD3
A
578 592Right-handed alpha
Helix 31
AD4
A
596 623Right-handed alpha
Helix 32
AD5
A
644 658Right-handed alpha
Helix 33
AD6
A
659 662Right-handed 310
Helix 34
AD7
B
26 41Right-handed alpha
Helix 35
AD8
B
42 50Right-handed alpha
Helix 36
AD9
B
51 54Right-handed 310
Helix 37
AE1
B
61 75Right-handed alpha
Helix 38
AE2
B
79 95Right-handed alpha
Helix 39
AE3
B
109 123Right-handed alpha
Helix 40
AE4
B
125 140Right-handed alpha
Helix 41
AE5
B
145 162Right-handed alpha
Helix 42
AE6
B
164 181Right-handed alpha
Helix 43
AE7
B
206 229Right-handed alpha
Helix 44
AE8
B
231 242Right-handed alpha
Helix 45
AE9
B
250 264Right-handed alpha
Helix 46
AF1
B
265 275Right-handed alpha
Helix 47
AF2
B
290 306Right-handed alpha
Helix 48
AF3
B
308 332Right-handed alpha
Helix 49
AF4
B
345 350Right-handed 310
Helix 50
AF5
B
353 369Right-handed alpha
Helix 51
AF6
B
370 385Right-handed alpha
Helix 52
AF7
B
388 402Right-handed alpha
Helix 53
AF8
B
443 448Right-handed alpha
Helix 54
AF9
B
457 471Right-handed alpha
Helix 55
AG1
B
524 547Right-handed alpha
Helix 56
AG2
B
548 561Right-handed alpha
Helix 57
AG3
B
566 584Right-handed alpha
Helix 58
AG4
B
586 593Right-handed alpha
Helix 59
AG5
B
594 599Right-handed 310
Helix 60
AG6
B
638 656Right-handed alpha
Helix 61
AG7
B
658 672Right-handed alpha
Helix 62
AG8
B
673 678Right-handed 310
Helix 63
AG9
B
679 694Right-handed alpha
Helix 64
AH1
B
695 706Right-handed alpha
Helix 65
AH2
C
64 76Right-handed alpha
Helix 66
AH3
C
76 83Right-handed alpha
Helix 67
AH4
C
84 96Right-handed alpha
Helix 68
AH5
C
97 99Right-handed 310
Helix 69
AH6
C
100 114Right-handed alpha
Helix 70
AH7
C
120 134Right-handed alpha
Helix 71
AH8
C
139 143Right-handed 310
Helix 72
AH9
C
145 154Right-handed alpha
Helix 73
AI1
C
178 190Right-handed alpha
Helix 74
AI2
C
193 199Right-handed 310
Helix 75
AI3
C
200 206Right-handed alpha
Helix 76
AI4
C
209 213Right-handed 310
Helix 77
AI5
C
218 230Right-handed alpha
Helix 78
AI6
C
233 238Right-handed alpha
Helix 79
AI7
C
257 270Right-handed alpha
Helix 80
AI8
C
274 277Right-handed 310
Helix 81
AI9
C
330 334Right-handed alpha
Helix 82
AJ1
C
339 353Right-handed alpha
Helix 83
AJ2
C
355 360Right-handed alpha
Helix 84
AJ3
C
366 372Right-handed alpha
Helix 85
AJ4
C
374 385Right-handed alpha
Helix 86
AJ5
C
390 400Right-handed alpha
Helix 87
AJ6
C
404 418Right-handed alpha
Helix 88
AJ7
C
423 438Right-handed alpha
Helix 89
AJ8
C
441 461Right-handed alpha
Helix 90
AJ9
C
470 481Right-handed alpha
Helix 91
AK1
C
484 496Right-handed alpha
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There are 2 sheets in PDB entry 8BFI. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
424 425first strand
Strand 2
B
433 435anti-parallel
Strand 3
C
243 245anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
240 241first strand
Strand 2
C
279 280anti-parallel
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