Analysis of interatomic Contacts of Structural Units in PDB entry:
8BFS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8BFS entry

There is 1 chain in PDB entry 8BFS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TRP 12ALA 302
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 8BFS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
18 21Right-handed 310
Helix 2
AA2
A
57 60Right-handed 310
Helix 3
AA3
A
62 74Right-handed alpha
Helix 4
AA4
A
105 113Right-handed alpha
Helix 5
AA5
A
117 138Right-handed alpha
Helix 6
AA6
A
146 148Right-handed 310
Helix 7
AA7
A
189 194Right-handed alpha
Helix 8
AA8
A
200 217Right-handed alpha
Helix 9
AA9
A
225 236Right-handed alpha
Helix 10
AB1
A
249 260Right-handed alpha
Helix 11
AB2
A
269 276Right-handed alpha
Helix 12
AB3
A
276 281Right-handed alpha
Helix 13
AB4
A
289 301Right-handed alpha
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There are 2 sheets in PDB entry 8BFS. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
14 15first strand
Strand 2
A
84 89parallel
Strand 3
A
93 99anti-parallel
Strand 4
A
48 55anti-parallel
Strand 5
A
35 42anti-parallel
Strand 6
A
23 32anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
150 152first strand
Strand 2
A
161 163anti-parallel
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