Analysis of interatomic Contacts of Structural Units in PDB entry:
8BFY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8BFY entry

There is 1 chain in PDB entry 8BFY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 62LYS 454
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 8BFY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
79 88Right-handed alpha
Helix 2
AA2
A
100 115Right-handed alpha
Helix 3
AA3
A
128 137Right-handed alpha
Helix 4
AA4
A
138 140Right-handed 310
Helix 5
AA5
A
142 146Right-handed 310
Helix 6
AA6
A
148 152Right-handed 310
Helix 7
AA7
A
153 160Right-handed alpha
Helix 8
AA8
A
183 189Right-handed alpha
Helix 9
AA9
A
194 201Right-handed alpha
Helix 10
AB1
A
205 219Right-handed alpha
Helix 11
AB2
A
229 239Right-handed alpha
Helix 12
AB3
A
257 273Right-handed alpha
Helix 13
AB4
A
283 292Right-handed alpha
Helix 14
AB5
A
303 312Right-handed alpha
Helix 15
AB6
A
313 317Right-handed 310
Helix 16
AB7
A
344 356Right-handed alpha
Helix 17
AB8
A
357 369Right-handed alpha
Helix 18
AB9
A
374 379Right-handed 310
Helix 19
AC1
A
380 385Right-handed alpha
Helix 20
AC2
A
388 392Right-handed 310
Helix 21
AC3
A
395 405Right-handed alpha
Helix 22
AC4
A
415 426Right-handed alpha
Helix 23
AC5
A
428 433Right-handed alpha
Helix 24
AC6
A
436 454Right-handed alpha
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There are 2 sheets in PDB entry 8BFY. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
91 98first strand
Strand 2
A
63 70parallel
Strand 3
A
121 125parallel
Strand 4
A
330 337anti-parallel
Strand 5
A
170 176anti-parallel
Strand 6
A
371 372anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
225 227first strand
Strand 2
A
295 299parallel
Strand 3
A
178 182anti-parallel
Strand 4
A
320 324anti-parallel
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