Analysis of interatomic Contacts of Structural Units in PDB entry:
8BGR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8BGR entry

There is 1 chain in PDB entry 8BGR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 2PRO 297
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 8BGR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
21 39Right-handed alpha
Helix 2
AA2
A
69 78Right-handed alpha
Helix 3
AA3
A
96 111Right-handed alpha
Helix 4
AA4
A
133 138Right-handed alpha
Helix 5
AA5
A
158 169Right-handed alpha
Helix 6
AA6
A
182 195Right-handed alpha
Helix 7
AA7
A
211 216Right-handed alpha
Helix 8
AA8
A
216 222Right-handed alpha
Helix 9
AA9
A
227 243Right-handed alpha
Helix 10
AB1
A
244 264Right-handed alpha
Helix 11
AB2
A
281 295Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 8BGR.

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
6 9first strand
Strand 2
A
47 50parallel
Strand 3
A
85 91parallel
Strand 4
A
112 118parallel
Strand 5
A
147 152parallel
Strand 6
A
173 176parallel
Strand 7
A
200 206parallel
Strand 8
A
270 275parallel
Strand 9
A
6 9parallel
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