Analysis of interatomic Contacts of Structural Units in PDB entry:
8BHG

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8BHG entry

There are 2 chains in PDB entry 8BHG (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASN 14	ASN 456
B	PRO 23	PHE 306

There are 44 helices in PDB entry 8BHG. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	14	27	Right-handed alpha
Helix 2	AA2	A	76	79	Right-handed 310
Helix 3	AA3	A	90	94	Right-handed 310
Helix 4	AA4	A	226	233	Right-handed alpha
Helix 5	AA5	A	233	246	Right-handed alpha
Helix 6	AA6	A	247	250	Right-handed 310
Helix 7	AA7	A	254	279	Right-handed alpha
Helix 8	AA8	A	287	314	Right-handed alpha
Helix 9	AA9	A	317	456	Right-handed alpha
Helix 10	AB1	B	24	36	Right-handed alpha
Helix 11	AB2	B	85	88	Right-handed 310
Helix 12	AB3	B	99	106	Right-handed 310
Helix 13	AB4	B	233	240	Right-handed alpha
Helix 14	AB5	B	240	254	Right-handed alpha
Helix 15	AB6	B	255	257	Right-handed 310
Helix 16	AB7	B	261	286	Right-handed alpha
Helix 17	AB8	B	294	322	Right-handed alpha
Helix 18	AB9	B	324	463	Right-handed alpha
Helix 19	AC1	C	15	27	Right-handed alpha
Helix 20	AC2	C	76	79	Right-handed 310
Helix 21	AC3	C	226	233	Right-handed alpha
Helix 22	AC4	C	233	246	Right-handed alpha
Helix 23	AC5	C	247	250	Right-handed 310
Helix 24	AC6	C	254	279	Right-handed alpha
Helix 25	AC7	C	287	314	Right-handed alpha
Helix 26	AC8	C	317	454	Right-handed alpha
Helix 27	AC9	D	16	27	Right-handed alpha
Helix 28	AD1	D	76	79	Right-handed 310
Helix 29	AD2	D	90	95	Right-handed alpha
Helix 30	AD3	D	226	233	Right-handed alpha
Helix 31	AD4	D	233	246	Right-handed alpha
Helix 32	AD5	D	247	250	Right-handed 310
Helix 33	AD6	D	254	279	Right-handed alpha
Helix 34	AD7	D	287	314	Right-handed alpha
Helix 35	AD8	D	317	455	Right-handed alpha
Helix 36	AD9	E	15	27	Right-handed alpha
Helix 37	AE1	E	76	79	Right-handed 310
Helix 38	AE2	E	91	97	Right-handed alpha
Helix 39	AE3	E	226	233	Right-handed alpha
Helix 40	AE4	E	233	246	Right-handed alpha
Helix 41	AE5	E	247	250	Right-handed 310
Helix 42	AE6	E	254	279	Right-handed alpha
Helix 43	AE7	E	287	314	Right-handed alpha
Helix 44	AE8	E	317	455	Right-handed alpha

There are 20 sheets in PDB entry 8BHG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	86	89	first strand
Strand 2	A	120	125	anti-parallel
Strand 3	A	129	141	anti-parallel
Strand 4	A	62	74	anti-parallel
Strand 5	A	42	57	anti-parallel
Strand 6	A	170	174	parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	107	112	first strand
Strand 2	A	129	141	anti-parallel
Strand 3	A	62	74	anti-parallel
Strand 4	A	42	57	anti-parallel
Strand 5	A	182	184	parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	102	104	first strand
Strand 2	A	159	162	anti-parallel
Strand 3	A	211	224	anti-parallel
Strand 4	A	153	156	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	102	104	first strand
Strand 2	A	159	162	anti-parallel
Strand 3	A	211	224	anti-parallel
Strand 4	A	194	208	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	95	98	first strand
Strand 2	B	129	134	anti-parallel
Strand 3	B	138	150	anti-parallel
Strand 4	B	116	121	anti-parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	95	98	first strand
Strand 2	B	129	134	anti-parallel
Strand 3	B	138	150	anti-parallel
Strand 4	B	71	83	anti-parallel
Strand 5	B	51	66	anti-parallel
Strand 6	B	179	190	parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	111	113	first strand
Strand 2	B	169	171	anti-parallel
Strand 3	B	219	231	anti-parallel
Strand 4	B	162	165	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	111	113	first strand
Strand 2	B	169	171	anti-parallel
Strand 3	B	219	231	anti-parallel
Strand 4	B	201	214	anti-parallel

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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	86	89	first strand
Strand 2	C	120	125	anti-parallel
Strand 3	C	129	141	anti-parallel
Strand 4	C	62	74	anti-parallel
Strand 5	C	42	57	anti-parallel
Strand 6	C	170	174	parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	107	112	first strand
Strand 2	C	129	141	anti-parallel
Strand 3	C	62	74	anti-parallel
Strand 4	C	42	57	anti-parallel
Strand 5	C	182	184	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	102	104	first strand
Strand 2	C	160	162	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	153	156	first strand
Strand 2	C	211	224	anti-parallel
Strand 3	C	194	208	anti-parallel

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There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	86	89	first strand
Strand 2	D	120	125	anti-parallel
Strand 3	D	129	141	anti-parallel
Strand 4	D	62	74	anti-parallel
Strand 5	D	42	57	anti-parallel
Strand 6	D	170	174	parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	107	112	first strand
Strand 2	D	129	141	anti-parallel
Strand 3	D	62	74	anti-parallel
Strand 4	D	42	57	anti-parallel
Strand 5	D	182	184	parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	102	104	first strand
Strand 2	D	159	162	anti-parallel
Strand 3	D	211	224	anti-parallel
Strand 4	D	153	156	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	102	104	first strand
Strand 2	D	159	162	anti-parallel
Strand 3	D	211	224	anti-parallel
Strand 4	D	194	208	anti-parallel

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There are 6 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	88	89	first strand
Strand 2	E	120	124	anti-parallel
Strand 3	E	129	141	anti-parallel
Strand 4	E	62	74	anti-parallel
Strand 5	E	42	57	anti-parallel
Strand 6	E	170	174	parallel

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There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	107	112	first strand
Strand 2	E	129	141	anti-parallel
Strand 3	E	62	74	anti-parallel
Strand 4	E	42	57	anti-parallel
Strand 5	E	182	184	parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	102	104	first strand
Strand 2	E	160	162	anti-parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	153	156	first strand
Strand 2	E	211	224	anti-parallel
Strand 3	E	194	208	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8BHG

Analysis of interatomic Contacts of Structural Units in PDB entry:
8BHG