Analysis of interatomic Contacts of Structural Units in PDB entry:
8BHR

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8BHR entry

There are 5 chains in PDB entry 8BHR (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASN 14	ASN 419
B	ASN 14	ASN 419
C	ASN 14	ASN 419
D	ASN 14	ASN 419
E	ASN 14	ASN 419

There are 45 helices in PDB entry 8BHR. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	15	27	Right-handed alpha
Helix 2	AA2	A	76	79	Right-handed 310
Helix 3	AA3	A	93	97	Right-handed 310
Helix 4	AA4	A	177	181	Right-handed alpha
Helix 5	AA5	A	227	233	Right-handed alpha
Helix 6	AA6	A	233	250	Right-handed alpha
Helix 7	AA7	A	254	280	Right-handed alpha
Helix 8	AA8	A	287	313	Right-handed alpha
Helix 9	AA9	A	317	419	Right-handed alpha
Helix 10	AB1	B	15	27	Right-handed alpha
Helix 11	AB2	B	76	79	Right-handed 310
Helix 12	AB3	B	93	97	Right-handed 310
Helix 13	AB4	B	177	181	Right-handed alpha
Helix 14	AB5	B	227	233	Right-handed alpha
Helix 15	AB6	B	233	250	Right-handed alpha
Helix 16	AB7	B	254	280	Right-handed alpha
Helix 17	AB8	B	287	313	Right-handed alpha
Helix 18	AB9	B	317	419	Right-handed alpha
Helix 19	AC1	C	15	27	Right-handed alpha
Helix 20	AC2	C	76	79	Right-handed 310
Helix 21	AC3	C	93	97	Right-handed 310
Helix 22	AC4	C	177	181	Right-handed alpha
Helix 23	AC5	C	227	233	Right-handed alpha
Helix 24	AC6	C	233	250	Right-handed alpha
Helix 25	AC7	C	254	280	Right-handed alpha
Helix 26	AC8	C	287	313	Right-handed alpha
Helix 27	AC9	C	317	419	Right-handed alpha
Helix 28	AD1	D	15	27	Right-handed alpha
Helix 29	AD2	D	76	79	Right-handed 310
Helix 30	AD3	D	93	97	Right-handed 310
Helix 31	AD4	D	177	181	Right-handed alpha
Helix 32	AD5	D	227	233	Right-handed alpha
Helix 33	AD6	D	233	250	Right-handed alpha
Helix 34	AD7	D	254	280	Right-handed alpha
Helix 35	AD8	D	287	313	Right-handed alpha
Helix 36	AD9	D	317	419	Right-handed alpha
Helix 37	AE1	E	15	27	Right-handed alpha
Helix 38	AE2	E	76	79	Right-handed 310
Helix 39	AE3	E	93	97	Right-handed 310
Helix 40	AE4	E	177	181	Right-handed alpha
Helix 41	AE5	E	227	233	Right-handed alpha
Helix 42	AE6	E	233	250	Right-handed alpha
Helix 43	AE7	E	254	280	Right-handed alpha
Helix 44	AE8	E	287	313	Right-handed alpha
Helix 45	AE9	E	317	419	Right-handed alpha

There are 15 sheets in PDB entry 8BHR. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	107	112	first strand
Strand 2	A	129	141	anti-parallel
Strand 3	A	62	74	anti-parallel
Strand 4	A	42	57	anti-parallel
Strand 5	A	170	174	parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	120	124	first strand
Strand 2	A	129	141	anti-parallel
Strand 3	A	62	74	anti-parallel
Strand 4	A	42	57	anti-parallel
Strand 5	A	182	184	parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	102	104	first strand
Strand 2	A	153	162	anti-parallel
Strand 3	A	212	223	anti-parallel
Strand 4	A	195	207	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	107	112	first strand
Strand 2	B	129	141	anti-parallel
Strand 3	B	62	74	anti-parallel
Strand 4	B	42	57	anti-parallel
Strand 5	B	170	174	parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	120	124	first strand
Strand 2	B	129	141	anti-parallel
Strand 3	B	62	74	anti-parallel
Strand 4	B	42	57	anti-parallel
Strand 5	B	182	184	parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	102	104	first strand
Strand 2	B	153	162	anti-parallel
Strand 3	B	212	223	anti-parallel
Strand 4	B	195	207	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	107	112	first strand
Strand 2	C	129	141	anti-parallel
Strand 3	C	62	74	anti-parallel
Strand 4	C	42	57	anti-parallel
Strand 5	C	170	174	parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	120	124	first strand
Strand 2	C	129	141	anti-parallel
Strand 3	C	62	74	anti-parallel
Strand 4	C	42	57	anti-parallel
Strand 5	C	182	184	parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	102	104	first strand
Strand 2	C	153	162	anti-parallel
Strand 3	C	212	223	anti-parallel
Strand 4	C	195	207	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	107	112	first strand
Strand 2	D	129	141	anti-parallel
Strand 3	D	62	74	anti-parallel
Strand 4	D	42	57	anti-parallel
Strand 5	D	170	174	parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	120	124	first strand
Strand 2	D	129	141	anti-parallel
Strand 3	D	62	74	anti-parallel
Strand 4	D	42	57	anti-parallel
Strand 5	D	182	184	parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	102	104	first strand
Strand 2	D	153	162	anti-parallel
Strand 3	D	212	223	anti-parallel
Strand 4	D	195	207	anti-parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	107	112	first strand
Strand 2	E	129	141	anti-parallel
Strand 3	E	62	74	anti-parallel
Strand 4	E	42	57	anti-parallel
Strand 5	E	170	174	parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	120	124	first strand
Strand 2	E	129	141	anti-parallel
Strand 3	E	62	74	anti-parallel
Strand 4	E	42	57	anti-parallel
Strand 5	E	182	184	parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	102	104	first strand
Strand 2	E	153	162	anti-parallel
Strand 3	E	212	223	anti-parallel
Strand 4	E	195	207	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8BHR

Analysis of interatomic Contacts of Structural Units in PDB entry:
8BHR