Analysis of interatomic Contacts of Structural Units in PDB entry:
8BIH

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8BIH entry

There are 4 chains in PDB entry 8BIH (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 0	LYS 318
B	SER 0	LYS 318
C	SER 0	LYS 318
D	SER 0	SER 282

There are213 helices in PDB entry 8BIH. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	0	7	Right-handed alpha
Helix 2	AA2	A	8	20	Right-handed alpha
Helix 3	AA3	A	22	31	Right-handed 310
Helix 4	AA4	A	34	43	Right-handed alpha
Helix 5	AA5	A	45	60	Right-handed alpha
Helix 6	AA6	A	75	80	Right-handed 310
Helix 7	AA7	A	83	93	Right-handed alpha
Helix 8	AA8	A	94	103	Right-handed alpha
Helix 9	AA9	A	103	108	Right-handed alpha
Helix 10	AB1	A	115	122	Right-handed alpha
Helix 11	AB2	A	124	130	Right-handed alpha
Helix 12	AB3	A	132	158	Right-handed alpha
Helix 13	AB4	A	159	163	Right-handed 310
Helix 14	AB5	A	174	182	Right-handed alpha
Helix 15	AB6	A	227	231	Right-handed 310
Helix 16	AB7	A	232	247	Right-handed alpha
Helix 17	AB8	A	266	277	Right-handed alpha
Helix 18	AB9	A	282	294	Right-handed alpha
Helix 19	AC1	B	1	7	Right-handed alpha
Helix 20	AC2	B	8	20	Right-handed alpha
Helix 21	AC3	B	23	27	Right-handed 310
Helix 22	AC4	B	34	43	Right-handed alpha
Helix 23	AC5	B	45	59	Right-handed alpha
Helix 24	AC6	B	73	80	Right-handed 310
Helix 25	AC7	B	83	93	Right-handed alpha
Helix 26	AC8	B	94	103	Right-handed alpha
Helix 27	AC9	B	103	108	Right-handed alpha
Helix 28	AD1	B	115	122	Right-handed alpha
Helix 29	AD2	B	124	130	Right-handed alpha
Helix 30	AD3	B	132	150	Right-handed alpha
Helix 31	AD4	B	150	158	Right-handed alpha
Helix 32	AD5	B	174	182	Right-handed alpha
Helix 33	AD6	B	227	231	Right-handed 310
Helix 34	AD7	B	232	247	Right-handed alpha
Helix 35	AD8	B	266	277	Right-handed alpha
Helix 36	AD9	B	282	293	Right-handed alpha
Helix 37	AE1	C	1	7	Right-handed alpha
Helix 38	AE2	C	8	21	Right-handed alpha
Helix 39	AE3	C	22	31	Right-handed 310
Helix 40	AE4	C	34	43	Right-handed alpha
Helix 41	AE5	C	45	59	Right-handed alpha
Helix 42	AE6	C	73	80	Right-handed 310
Helix 43	AE7	C	83	93	Right-handed alpha
Helix 44	AE8	C	94	102	Right-handed alpha
Helix 45	AE9	C	103	108	Right-handed alpha
Helix 46	AF1	C	115	122	Right-handed alpha
Helix 47	AF2	C	124	132	Right-handed alpha
Helix 48	AF3	C	132	158	Right-handed alpha
Helix 49	AF4	C	159	163	Right-handed 310
Helix 50	AF5	C	174	182	Right-handed alpha
Helix 51	AF6	C	227	231	Right-handed 310
Helix 52	AF7	C	232	247	Right-handed alpha
Helix 53	AF8	C	266	277	Right-handed alpha
Helix 54	AF9	C	282	292	Right-handed alpha
Helix 55	AG1	D	1	7	Right-handed alpha
Helix 56	AG2	D	8	20	Right-handed alpha
Helix 57	AG3	D	23	31	Right-handed 310
Helix 58	AG4	D	34	43	Right-handed alpha
Helix 59	AG5	D	45	59	Right-handed alpha
Helix 60	AG6	D	74	80	Right-handed 310
Helix 61	AG7	D	83	93	Right-handed alpha
Helix 62	AG8	D	94	102	Right-handed alpha
Helix 63	AG9	D	103	108	Right-handed alpha
Helix 64	AH1	D	115	122	Right-handed alpha
Helix 65	AH2	D	124	130	Right-handed alpha
Helix 66	AH3	D	132	158	Right-handed alpha
Helix 67	AH4	D	159	163	Right-handed 310
Helix 68	AH5	D	174	184	Right-handed alpha
Helix 69	AH6	D	227	231	Right-handed 310
Helix 70	AH7	D	232	247	Right-handed alpha
Helix 71	AH8	D	266	277	Right-handed alpha
Helix 72	AH9	D	282	294	Right-handed alpha
Helix 73	AI1	E	2	7	Right-handed alpha
Helix 74	AI2	E	8	21	Right-handed alpha
Helix 75	AI3	E	23	31	Right-handed 310
Helix 76	AI4	E	34	43	Right-handed alpha
Helix 77	AI5	E	45	59	Right-handed alpha
Helix 78	AI6	E	73	80	Right-handed 310
Helix 79	AI7	E	83	93	Right-handed alpha
Helix 80	AI8	E	94	103	Right-handed alpha
Helix 81	AI9	E	103	108	Right-handed alpha
Helix 82	AJ1	E	115	122	Right-handed alpha
Helix 83	AJ2	E	124	131	Right-handed alpha
Helix 84	AJ3	E	132	158	Right-handed alpha
Helix 85	AJ4	E	174	182	Right-handed alpha
Helix 86	AJ5	E	227	231	Right-handed 310
Helix 87	AJ6	E	232	247	Right-handed alpha
Helix 88	AJ7	E	266	277	Right-handed alpha
Helix 89	AJ8	E	282	293	Right-handed alpha
Helix 90	AJ9	F	1	7	Right-handed alpha
Helix 91	AK1	F	8	21	Right-handed alpha
Helix 92	AK2	F	23	31	Right-handed 310
Helix 93	AK3	F	34	43	Right-handed alpha
Helix 94	AK4	F	45	59	Right-handed alpha
Helix 95	AK5	F	75	80	Right-handed 310
Helix 96	AK6	F	83	93	Right-handed alpha
Helix 97	AK7	F	94	108	Right-handed alpha
Helix 98	AK8	F	115	122	Right-handed alpha
Helix 99	AK9	F	124	132	Right-handed alpha
Helix 100	AL1	F	132	149	Right-handed alpha
Helix 101	AL2	F	150	158	Right-handed alpha
Helix 102	AL3	F	159	163	Right-handed 310
Helix 103	AL4	F	174	182	Right-handed alpha
Helix 104	AL5	F	227	231	Right-handed 310
Helix 105	AL6	F	232	245	Right-handed alpha
Helix 106	AL7	F	266	277	Right-handed alpha
Helix 107	AL8	F	282	293	Right-handed alpha
Helix 108	AL9	G	1	7	Right-handed alpha
Helix 109	AM1	G	8	20	Right-handed alpha
Helix 110	AM2	G	22	31	Right-handed 310
Helix 111	AM3	G	34	43	Right-handed alpha
Helix 112	AM4	G	45	59	Right-handed alpha
Helix 113	AM5	G	73	80	Right-handed 310
Helix 114	AM6	G	83	93	Right-handed alpha
Helix 115	AM7	G	94	102	Right-handed alpha
Helix 116	AM8	G	103	108	Right-handed alpha
Helix 117	AM9	G	115	122	Right-handed alpha
Helix 118	AN1	G	124	130	Right-handed alpha
Helix 119	AN2	G	132	158	Right-handed alpha
Helix 120	AN3	G	174	184	Right-handed alpha
Helix 121	AN4	G	227	231	Right-handed 310
Helix 122	AN5	G	232	247	Right-handed alpha
Helix 123	AN6	G	266	277	Right-handed alpha
Helix 124	AN7	G	282	293	Right-handed alpha
Helix 125	AN8	H	1	7	Right-handed alpha
Helix 126	AN9	H	8	21	Right-handed alpha
Helix 127	AO1	H	22	31	Right-handed 310
Helix 128	AO2	H	34	43	Right-handed alpha
Helix 129	AO3	H	45	59	Right-handed alpha
Helix 130	AO4	H	75	80	Right-handed 310
Helix 131	AO5	H	83	93	Right-handed alpha
Helix 132	AO6	H	94	108	Right-handed alpha
Helix 133	AO7	H	115	122	Right-handed alpha
Helix 134	AO8	H	124	130	Right-handed alpha
Helix 135	AO9	H	132	149	Right-handed alpha
Helix 136	AP1	H	150	158	Right-handed alpha
Helix 137	AP2	H	159	163	Right-handed 310
Helix 138	AP3	H	174	182	Right-handed alpha
Helix 139	AP4	H	227	231	Right-handed 310
Helix 140	AP5	H	232	247	Right-handed alpha
Helix 141	AP6	H	266	277	Right-handed alpha
Helix 142	AP7	H	282	293	Right-handed alpha
Helix 143	AP8	I	1	7	Right-handed alpha
Helix 144	AP9	I	8	20	Right-handed alpha
Helix 145	AQ1	I	22	31	Right-handed 310
Helix 146	AQ2	I	34	43	Right-handed alpha
Helix 147	AQ3	I	45	59	Right-handed alpha
Helix 148	AQ4	I	73	80	Right-handed 310
Helix 149	AQ5	I	83	93	Right-handed alpha
Helix 150	AQ6	I	94	102	Right-handed alpha
Helix 151	AQ7	I	103	108	Right-handed alpha
Helix 152	AQ8	I	115	122	Right-handed alpha
Helix 153	AQ9	I	124	130	Right-handed alpha
Helix 154	AR1	I	132	158	Right-handed alpha
Helix 155	AR2	I	159	163	Right-handed 310
Helix 156	AR3	I	174	181	Right-handed alpha
Helix 157	AR4	I	227	231	Right-handed 310
Helix 158	AR5	I	232	247	Right-handed alpha
Helix 159	AR6	I	266	277	Right-handed alpha
Helix 160	AR7	I	282	293	Right-handed alpha
Helix 161	AR8	J	1	7	Right-handed alpha
Helix 162	AR9	J	8	20	Right-handed alpha
Helix 163	AS1	J	22	31	Right-handed 310
Helix 164	AS2	J	34	43	Right-handed alpha
Helix 165	AS3	J	45	59	Right-handed alpha
Helix 166	AS4	J	74	80	Right-handed 310
Helix 167	AS5	J	83	93	Right-handed alpha
Helix 168	AS6	J	94	102	Right-handed alpha
Helix 169	AS7	J	103	108	Right-handed alpha
Helix 170	AS8	J	115	122	Right-handed alpha
Helix 171	AS9	J	124	130	Right-handed alpha
Helix 172	AT1	J	132	158	Right-handed alpha
Helix 173	AT2	J	174	182	Right-handed alpha
Helix 174	AT3	J	227	231	Right-handed 310
Helix 175	AT4	J	232	247	Right-handed alpha
Helix 176	AT5	J	266	277	Right-handed alpha
Helix 177	AT6	J	282	294	Right-handed alpha
Helix 178	AT7	K	1	7	Right-handed alpha
Helix 179	AT8	K	8	21	Right-handed alpha
Helix 180	AT9	K	22	31	Right-handed 310
Helix 181	AU1	K	34	43	Right-handed alpha
Helix 182	AU2	K	45	59	Right-handed alpha
Helix 183	AU3	K	73	80	Right-handed 310
Helix 184	AU4	K	83	93	Right-handed alpha
Helix 185	AU5	K	94	102	Right-handed alpha
Helix 186	AU6	K	103	108	Right-handed alpha
Helix 187	AU7	K	115	122	Right-handed alpha
Helix 188	AU8	K	124	132	Right-handed alpha
Helix 189	AU9	K	132	158	Right-handed alpha
Helix 190	AV1	K	159	163	Right-handed 310
Helix 191	AV2	K	174	182	Right-handed alpha
Helix 192	AV3	K	227	231	Right-handed 310
Helix 193	AV4	K	232	247	Right-handed alpha
Helix 194	AV5	K	266	277	Right-handed alpha
Helix 195	AV6	K	282	293	Right-handed alpha
Helix 196	AV7	L	1	7	Right-handed alpha
Helix 197	AV8	L	8	21	Right-handed alpha
Helix 198	AV9	L	22	31	Right-handed 310
Helix 199	AW1	L	34	43	Right-handed alpha
Helix 200	AW2	L	45	59	Right-handed alpha
Helix 201	AW3	L	73	80	Right-handed 310
Helix 202	AW4	L	83	93	Right-handed alpha
Helix 203	AW5	L	94	103	Right-handed alpha
Helix 204	AW6	L	103	108	Right-handed alpha
Helix 205	AW7	L	115	122	Right-handed alpha
Helix 206	AW8	L	124	132	Right-handed alpha
Helix 207	AW9	L	132	158	Right-handed alpha
Helix 208	AX1	L	159	163	Right-handed 310
Helix 209	AX2	L	174	182	Right-handed alpha
Helix 210	AX3	L	227	231	Right-handed 310
Helix 211	AX4	L	232	247	Right-handed alpha
Helix 212	AX5	L	266	277	Right-handed alpha
Helix 213	AX6	L	282	293	Right-handed alpha

There are 24 sheets in PDB entry 8BIH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	62	65	first strand
Strand 2	A	68	71	anti-parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	204	208	first strand
Strand 2	A	188	193	parallel
Strand 3	A	165	169	parallel
Strand 4	A	221	225	parallel
Strand 5	A	252	258	parallel
Strand 6	A	308	317	anti-parallel
Strand 7	A	295	305	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	62	65	first strand
Strand 2	B	68	71	anti-parallel

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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	204	208	first strand
Strand 2	B	188	193	parallel
Strand 3	B	165	169	parallel
Strand 4	B	221	225	parallel
Strand 5	B	252	258	parallel
Strand 6	B	309	317	anti-parallel
Strand 7	B	295	304	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	62	64	first strand
Strand 2	C	69	71	anti-parallel

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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	204	208	first strand
Strand 2	C	188	193	parallel
Strand 3	C	165	169	parallel
Strand 4	C	221	225	parallel
Strand 5	C	252	258	parallel
Strand 6	C	309	317	anti-parallel
Strand 7	C	295	304	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	62	65	first strand
Strand 2	D	68	71	anti-parallel

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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	204	208	first strand
Strand 2	D	188	193	parallel
Strand 3	D	165	169	parallel
Strand 4	D	221	225	parallel
Strand 5	D	252	258	parallel
Strand 6	D	309	317	anti-parallel
Strand 7	D	295	304	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	62	64	first strand
Strand 2	E	69	71	anti-parallel

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There are 7 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	204	208	first strand
Strand 2	E	188	193	parallel
Strand 3	E	165	169	parallel
Strand 4	E	221	225	parallel
Strand 5	E	252	258	parallel
Strand 6	E	309	317	anti-parallel
Strand 7	E	295	304	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	62	65	first strand
Strand 2	F	68	71	anti-parallel

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There are 7 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	204	208	first strand
Strand 2	F	188	193	parallel
Strand 3	F	165	169	parallel
Strand 4	F	221	225	parallel
Strand 5	F	252	258	parallel
Strand 6	F	308	317	anti-parallel
Strand 7	F	295	305	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	62	65	first strand
Strand 2	G	68	71	anti-parallel

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There are 7 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	204	208	first strand
Strand 2	G	188	193	parallel
Strand 3	G	165	169	parallel
Strand 4	G	221	225	parallel
Strand 5	G	252	258	parallel
Strand 6	G	309	317	anti-parallel
Strand 7	G	295	304	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	62	65	first strand
Strand 2	H	68	71	anti-parallel

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There are 7 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	204	208	first strand
Strand 2	H	188	193	parallel
Strand 3	H	165	169	parallel
Strand 4	H	221	225	parallel
Strand 5	H	252	258	parallel
Strand 6	H	309	317	anti-parallel
Strand 7	H	295	304	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	62	65	first strand
Strand 2	I	68	71	anti-parallel

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There are 7 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	204	208	first strand
Strand 2	I	188	193	parallel
Strand 3	I	165	169	parallel
Strand 4	I	221	225	parallel
Strand 5	I	252	258	parallel
Strand 6	I	309	317	anti-parallel
Strand 7	I	295	304	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	62	65	first strand
Strand 2	J	68	71	anti-parallel

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There are 7 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	204	208	first strand
Strand 2	J	188	193	parallel
Strand 3	J	165	169	parallel
Strand 4	J	221	225	parallel
Strand 5	J	252	258	parallel
Strand 6	J	308	317	anti-parallel
Strand 7	J	295	305	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	62	64	first strand
Strand 2	K	69	71	anti-parallel

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There are 7 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	204	208	first strand
Strand 2	K	188	193	parallel
Strand 3	K	165	169	parallel
Strand 4	K	221	225	parallel
Strand 5	K	252	258	parallel
Strand 6	K	309	317	anti-parallel
Strand 7	K	295	304	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	62	64	first strand
Strand 2	L	69	71	anti-parallel

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There are 7 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	204	208	first strand
Strand 2	L	188	193	parallel
Strand 3	L	165	169	parallel
Strand 4	L	221	225	parallel
Strand 5	L	252	258	parallel
Strand 6	L	309	317	anti-parallel
Strand 7	L	295	304	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8BIH

Analysis of interatomic Contacts of Structural Units in PDB entry:
8BIH