Analysis of interatomic Contacts of Structural Units in PDB entry:
8BK6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8BK6 entry

There are 2 chains in PDB entry 8BK6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 100SER 212
B
 GLY 100SER 212
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 8BK6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
144 148Right-handed alpha
Helix 2
AA2
A
156 158Right-handed 310
Helix 3
AA3
A
159 167Right-handed alpha
Helix 4
AA4
A
180 184Right-handed 310
Helix 5
AA5
B
156 158Right-handed 310
Helix 6
AA6
B
159 169Right-handed alpha
Helix 7
AA7
B
180 184Right-handed 310
Helix 8
AA8
B
185 189Right-handed 310
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There are 4 sheets in PDB entry 8BK6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
102 103first strand
Strand 2
A
109 114anti-parallel
Strand 3
A
174 179anti-parallel
Strand 4
A
200 210anti-parallel
Strand 5
A
126 134anti-parallel
Strand 6
A
140 143anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
102 103first strand
Strand 2
A
109 114anti-parallel
Strand 3
A
174 179anti-parallel
Strand 4
A
200 210anti-parallel
Strand 5
A
126 134anti-parallel
Strand 6
A
151 154anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
102 103first strand
Strand 2
B
109 114anti-parallel
Strand 3
B
174 179anti-parallel
Strand 4
B
200 210anti-parallel
Strand 5
B
126 135anti-parallel
Strand 6
B
140 143anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
102 103first strand
Strand 2
B
109 114anti-parallel
Strand 3
B
174 179anti-parallel
Strand 4
B
200 210anti-parallel
Strand 5
B
126 135anti-parallel
Strand 6
B
151 154anti-parallel
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