Analysis of interatomic Contacts of Structural Units in PDB entry:
8BLJ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8BLJ entry

There are 3 chains in PDB entry 8BLJ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LEU 437	SER 815
B	LEU 437	THR 814
C	LEU 437	LYS 547

There are 65 helices in PDB entry 8BLJ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	465	479	Right-handed alpha
Helix 2	AA2	A	502	510	Right-handed alpha
Helix 3	AA3	A	523	528	Right-handed alpha
Helix 4	AA4	A	667	673	Right-handed alpha
Helix 5	AA5	A	685	697	Right-handed alpha
Helix 6	AA6	A	703	713	Right-handed alpha
Helix 7	AA7	A	714	718	Right-handed 310
Helix 8	AA8	A	724	735	Right-handed alpha
Helix 9	AA9	A	743	752	Right-handed alpha
Helix 10	AB1	A	779	794	Right-handed alpha
Helix 11	AB2	A	795	805	Right-handed alpha
Helix 12	AB3	B	465	479	Right-handed alpha
Helix 13	AB4	B	502	510	Right-handed alpha
Helix 14	AB5	B	523	528	Right-handed alpha
Helix 15	AB6	B	667	673	Right-handed alpha
Helix 16	AB7	B	685	697	Right-handed alpha
Helix 17	AB8	B	703	713	Right-handed alpha
Helix 18	AB9	B	724	735	Right-handed alpha
Helix 19	AC1	B	743	752	Right-handed alpha
Helix 20	AC2	B	779	794	Right-handed alpha
Helix 21	AC3	B	795	805	Right-handed alpha
Helix 22	AC4	C	465	479	Right-handed alpha
Helix 23	AC5	C	502	510	Right-handed alpha
Helix 24	AC6	C	523	528	Right-handed alpha
Helix 25	AC7	C	667	673	Right-handed alpha
Helix 26	AC8	C	685	697	Right-handed alpha
Helix 27	AC9	C	702	713	Right-handed alpha
Helix 28	AD1	C	714	718	Right-handed 310
Helix 29	AD2	C	724	734	Right-handed alpha
Helix 30	AD3	C	743	752	Right-handed alpha
Helix 31	AD4	C	779	794	Right-handed alpha
Helix 32	AD5	C	795	805	Right-handed alpha
Helix 33	AD6	D	465	479	Right-handed alpha
Helix 34	AD7	D	502	510	Right-handed alpha
Helix 35	AD8	D	523	528	Right-handed alpha
Helix 36	AD9	D	667	673	Right-handed alpha
Helix 37	AE1	D	685	697	Right-handed alpha
Helix 38	AE2	D	703	713	Right-handed alpha
Helix 39	AE3	D	714	718	Right-handed 310
Helix 40	AE4	D	724	735	Right-handed alpha
Helix 41	AE5	D	743	753	Right-handed alpha
Helix 42	AE6	D	779	794	Right-handed alpha
Helix 43	AE7	D	795	805	Right-handed alpha
Helix 44	AE8	E	465	479	Right-handed alpha
Helix 45	AE9	E	502	510	Right-handed alpha
Helix 46	AF1	E	523	528	Right-handed alpha
Helix 47	AF2	E	667	673	Right-handed alpha
Helix 48	AF3	E	685	697	Right-handed alpha
Helix 49	AF4	E	703	713	Right-handed alpha
Helix 50	AF5	E	714	718	Right-handed 310
Helix 51	AF6	E	724	735	Right-handed alpha
Helix 52	AF7	E	743	752	Right-handed alpha
Helix 53	AF8	E	779	794	Right-handed alpha
Helix 54	AF9	E	795	805	Right-handed alpha
Helix 55	AG1	F	465	479	Right-handed alpha
Helix 56	AG2	F	502	510	Right-handed alpha
Helix 57	AG3	F	523	528	Right-handed alpha
Helix 58	AG4	F	667	673	Right-handed alpha
Helix 59	AG5	F	685	696	Right-handed alpha
Helix 60	AG6	F	703	713	Right-handed alpha
Helix 61	AG7	F	714	718	Right-handed 310
Helix 62	AG8	F	724	734	Right-handed alpha
Helix 63	AG9	F	743	752	Right-handed alpha
Helix 64	AH1	F	779	795	Right-handed alpha
Helix 65	AH2	F	795	805	Right-handed alpha

There are 24 sheets in PDB entry 8BLJ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	481	486	first strand
Strand 2	A	438	443	parallel
Strand 3	A	515	516	parallel
Strand 4	A	773	774	anti-parallel
Strand 5	A	531	532	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	451	452	first strand
Strand 2	A	463	464	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	537	539	first strand
Strand 2	A	768	770	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	678	680	first strand
Strand 2	A	737	742	parallel
Strand 3	A	541	546	anti-parallel
Strand 4	A	758	761	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	481	486	first strand
Strand 2	B	438	443	parallel
Strand 3	B	515	516	parallel
Strand 4	B	773	774	anti-parallel
Strand 5	B	531	532	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	451	452	first strand
Strand 2	B	463	464	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	537	539	first strand
Strand 2	B	768	770	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	678	680	first strand
Strand 2	B	737	742	parallel
Strand 3	B	541	546	anti-parallel
Strand 4	B	758	761	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	481	486	first strand
Strand 2	C	438	443	parallel
Strand 3	C	515	516	parallel
Strand 4	C	773	774	anti-parallel
Strand 5	C	531	532	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	451	452	first strand
Strand 2	C	463	464	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	537	539	first strand
Strand 2	C	768	770	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	679	680	first strand
Strand 2	C	738	742	parallel
Strand 3	C	541	546	anti-parallel
Strand 4	C	758	761	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	481	486	first strand
Strand 2	D	438	443	parallel
Strand 3	D	515	516	parallel
Strand 4	D	773	774	anti-parallel
Strand 5	D	531	532	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	451	452	first strand
Strand 2	D	463	464	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	537	539	first strand
Strand 2	D	768	770	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	678	680	first strand
Strand 2	D	737	742	parallel
Strand 3	D	541	546	anti-parallel
Strand 4	D	758	761	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	481	486	first strand
Strand 2	E	438	443	parallel
Strand 3	E	515	516	parallel
Strand 4	E	773	774	anti-parallel
Strand 5	E	531	532	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	451	452	first strand
Strand 2	E	463	464	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	537	539	first strand
Strand 2	E	768	770	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	678	680	first strand
Strand 2	E	737	742	parallel
Strand 3	E	541	546	anti-parallel
Strand 4	E	758	761	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	481	486	first strand
Strand 2	F	438	443	parallel
Strand 3	F	515	516	parallel
Strand 4	F	773	774	anti-parallel
Strand 5	F	531	532	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	451	452	first strand
Strand 2	F	463	464	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	537	539	first strand
Strand 2	F	768	770	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	678	680	first strand
Strand 2	F	737	742	parallel
Strand 3	F	541	546	anti-parallel
Strand 4	F	758	761	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8BLJ

Analysis of interatomic Contacts of Structural Units in PDB entry:
8BLJ