Analysis of interatomic Contacts of Structural Units in PDB entry:
8BM3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8BM3 entry

There are 4 chains in PDB entry 8BM3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
MET 1PRO 239
B
MET 1PRO 239
C
MET 1PRO 239
D
MET 1PRO 239
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 44 helices in PDB entry 8BM3. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
1 26Right-handed alpha
Helix 2
AA2
A
34 47Right-handed alpha
Helix 3
AA3
A
51 69Right-handed alpha
Helix 4
AA4
A
71 101Right-handed alpha
Helix 5
AA5
A
104 114Right-handed alpha
Helix 6
AA6
A
117 122Right-handed alpha
Helix 7
AA7
A
125 138Right-handed alpha
Helix 8
AA8
A
144 155Right-handed alpha
Helix 9
AA9
A
162 178Right-handed alpha
Helix 10
AB1
A
183 204Right-handed alpha
Helix 11
AB2
A
208 234Right-handed alpha
Helix 12
AB3
B
2 26Right-handed alpha
Helix 13
AB4
B
34 46Right-handed alpha
Helix 14
AB5
B
51 69Right-handed alpha
Helix 15
AB6
B
71 101Right-handed alpha
Helix 16
AB7
B
104 114Right-handed alpha
Helix 17
AB8
B
117 122Right-handed alpha
Helix 18
AB9
B
125 138Right-handed alpha
Helix 19
AC1
B
144 155Right-handed alpha
Helix 20
AC2
B
162 178Right-handed alpha
Helix 21
AC3
B
183 204Right-handed alpha
Helix 22
AC4
B
208 234Right-handed alpha
Helix 23
AC5
C
2 26Right-handed alpha
Helix 24
AC6
C
34 46Right-handed alpha
Helix 25
AC7
C
51 69Right-handed alpha
Helix 26
AC8
C
71 101Right-handed alpha
Helix 27
AC9
C
104 114Right-handed alpha
Helix 28
AD1
C
117 122Right-handed alpha
Helix 29
AD2
C
125 138Right-handed alpha
Helix 30
AD3
C
144 155Right-handed alpha
Helix 31
AD4
C
163 178Right-handed alpha
Helix 32
AD5
C
183 204Right-handed alpha
Helix 33
AD6
C
208 234Right-handed alpha
Helix 34
AD7
D
2 26Right-handed alpha
Helix 35
AD8
D
34 47Right-handed alpha
Helix 36
AD9
D
51 69Right-handed alpha
Helix 37
AE1
D
71 101Right-handed alpha
Helix 38
AE2
D
104 114Right-handed alpha
Helix 39
AE3
D
117 122Right-handed alpha
Helix 40
AE4
D
125 138Right-handed alpha
Helix 41
AE5
D
144 155Right-handed alpha
Helix 42
AE6
D
163 178Right-handed alpha
Helix 43
AE7
D
183 205Right-handed alpha
Helix 44
AE8
D
208 234Right-handed alpha
Back to top of page
There are no sheets in PDB entry 8BM3

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il