Analysis of interatomic Contacts of Structural Units in PDB entry:
8BN1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8BN1 entry

There are 6 chains in PDB entry 8BN1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 20ALA 614
B
 SER 19ALA 614
C
 ALA 0SER 4
C
 CYS 6ALA 16
D
 ALA 0SER 4
D
 CYS 6ALA 16
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 66 helices in PDB entry 8BN1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
20 53Right-handed alpha
Helix 2
AA2
A
55 81Right-handed alpha
Helix 3
AA3
A
82 83Right-handed 310
Helix 4
AA4
A
84 88Right-handed 310
Helix 5
AA5
A
90 102Right-handed alpha
Helix 6
AA6
A
111 129Right-handed alpha
Helix 7
AA7
A
146 155Right-handed alpha
Helix 8
AA8
A
157 176Right-handed alpha
Helix 9
AA9
A
176 194Right-handed alpha
Helix 10
AB1
A
198 204Right-handed alpha
Helix 11
AB2
A
205 208Right-handed 310
Helix 12
AB3
A
220 232Right-handed alpha
Helix 13
AB4
A
233 252Right-handed alpha
Helix 14
AB5
A
275 282Right-handed 310
Helix 15
AB6
A
293 301Right-handed alpha
Helix 16
AB7
A
303 319Right-handed alpha
Helix 17
AB8
A
324 331Right-handed alpha
Helix 18
AB9
A
365 385Right-handed alpha
Helix 19
AC1
A
389 393Right-handed 310
Helix 20
AC2
A
399 413Right-handed alpha
Helix 21
AC3
A
414 421Right-handed alpha
Helix 22
AC4
A
431 447Right-handed alpha
Helix 23
AC5
A
448 465Right-handed alpha
Helix 24
AC6
A
469 471Right-handed 310
Helix 25
AC7
A
472 484Right-handed alpha
Helix 26
AC8
A
499 502Right-handed 310
Helix 27
AC9
A
503 508Right-handed alpha
Helix 28
AD1
A
513 533Right-handed alpha
Helix 29
AD2
A
538 542Right-handed 310
Helix 30
AD3
A
547 559Right-handed alpha
Helix 31
AD4
A
560 564Right-handed 310
Helix 32
AD5
A
565 574Right-handed alpha
Helix 33
AD6
A
581 588Right-handed alpha
Helix 34
AD7
A
588 599Right-handed alpha
Helix 35
AD8
B
20 53Right-handed alpha
Helix 36
AD9
B
55 79Right-handed alpha
Helix 37
AE1
B
84 88Right-handed 310
Helix 38
AE2
B
90 102Right-handed alpha
Helix 39
AE3
B
109 129Right-handed alpha
Helix 40
AE4
B
146 155Right-handed alpha
Helix 41
AE5
B
157 172Right-handed alpha
Helix 42
AE6
B
175 194Right-handed alpha
Helix 43
AE7
B
198 204Right-handed alpha
Helix 44
AE8
B
205 208Right-handed 310
Helix 45
AE9
B
220 232Right-handed alpha
Helix 46
AF1
B
233 252Right-handed alpha
Helix 47
AF2
B
265 267Right-handed 310
Helix 48
AF3
B
275 282Right-handed 310
Helix 49
AF4
B
293 301Right-handed alpha
Helix 50
AF5
B
303 319Right-handed alpha
Helix 51
AF6
B
324 331Right-handed alpha
Helix 52
AF7
B
365 385Right-handed alpha
Helix 53
AF8
B
399 413Right-handed alpha
Helix 54
AF9
B
414 422Right-handed alpha
Helix 55
AG1
B
431 446Right-handed alpha
Helix 56
AG2
B
448 465Right-handed alpha
Helix 57
AG3
B
469 471Right-handed 310
Helix 58
AG4
B
472 486Right-handed alpha
Helix 59
AG5
B
503 508Right-handed alpha
Helix 60
AG6
B
513 533Right-handed alpha
Helix 61
AG7
B
538 542Right-handed 310
Helix 62
AG8
B
547 559Right-handed alpha
Helix 63
AG9
B
565 574Right-handed alpha
Helix 64
AH1
B
581 588Right-handed alpha
Helix 65
AH2
B
588 599Right-handed alpha
Helix 66
AH3
D
11 15Right-handed 310
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There are 6 sheets in PDB entry 8BN1. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
131 132first strand
Strand 2
A
142 143anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
262 263first strand
Strand 2
A
487 488parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
347 352first strand
Strand 2
A
355 359anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
131 134first strand
Strand 2
B
137 143anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
262 263first strand
Strand 2
B
487 488parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
347 352first strand
Strand 2
B
355 359anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il