Analysis of interatomic Contacts of Structural Units in PDB entry:
8BN2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8BN2 entry

There are 2 chains in PDB entry 8BN2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 436SER 815
B
 LEU 437HIS 816
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 8BN2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
465 479Right-handed alpha
Helix 2
AA2
A
502 510Right-handed alpha
Helix 3
AA3
A
523 528Right-handed alpha
Helix 4
AA4
A
667 673Right-handed alpha
Helix 5
AA5
A
685 696Right-handed alpha
Helix 6
AA6
A
703 713Right-handed alpha
Helix 7
AA7
A
724 735Right-handed alpha
Helix 8
AA8
A
743 752Right-handed alpha
Helix 9
AA9
A
779 794Right-handed alpha
Helix 10
AB1
A
795 805Right-handed alpha
Helix 11
AB2
B
465 479Right-handed alpha
Helix 12
AB3
B
502 510Right-handed alpha
Helix 13
AB4
B
523 530Right-handed alpha
Helix 14
AB5
B
667 673Right-handed alpha
Helix 15
AB6
B
685 696Right-handed alpha
Helix 16
AB7
B
703 713Right-handed alpha
Helix 17
AB8
B
714 718Right-handed 310
Helix 18
AB9
B
724 735Right-handed alpha
Helix 19
AC1
B
743 752Right-handed alpha
Helix 20
AC2
B
780 794Right-handed alpha
Helix 21
AC3
B
795 805Right-handed alpha
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There are 8 sheets in PDB entry 8BN2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
481 486first strand
Strand 2
A
438 443parallel
Strand 3
A
515 516parallel
Strand 4
A
773 774anti-parallel
Strand 5
A
531 532anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
451 454first strand
Strand 2
A
462 464anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
537 539first strand
Strand 2
A
768 770anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
678 680first strand
Strand 2
A
737 742parallel
Strand 3
A
541 546anti-parallel
Strand 4
A
758 761anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
481 486first strand
Strand 2
B
438 443parallel
Strand 3
B
515 516parallel
Strand 4
B
773 774anti-parallel
Strand 5
B
531 532anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
451 453first strand
Strand 2
B
462 464anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
537 539first strand
Strand 2
B
768 770anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
679 680first strand
Strand 2
B
738 742parallel
Strand 3
B
541 546anti-parallel
Strand 4
B
758 761anti-parallel
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