Analysis of interatomic Contacts of Structural Units in PDB entry:
8BOU

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8BOU entry

There are 2 chains in PDB entry 8BOU (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLY 18	SER 824
B	HIS 20	LEU 454

There are 54 helices in PDB entry 8BOU. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	179	185	Right-handed alpha
Helix 2	AA2	A	186	191	Right-handed alpha
Helix 3	AA3	A	209	214	Right-handed 310
Helix 4	AA4	A	244	249	Right-handed alpha
Helix 5	AA5	A	257	262	Right-handed alpha
Helix 6	AA6	A	301	312	Right-handed alpha
Helix 7	AA7	A	314	335	Right-handed alpha
Helix 8	AA8	A	343	352	Right-handed alpha
Helix 9	AA9	A	352	365	Right-handed alpha
Helix 10	AB1	A	381	390	Right-handed alpha
Helix 11	AB2	A	395	409	Right-handed alpha
Helix 12	AB3	A	434	442	Right-handed alpha
Helix 13	AB4	A	450	452	Right-handed 310
Helix 14	AB5	A	453	466	Right-handed alpha
Helix 15	AB6	A	468	473	Right-handed alpha
Helix 16	AB7	A	485	499	Right-handed alpha
Helix 17	AB8	A	526	547	Right-handed alpha
Helix 18	AB9	A	548	570	Right-handed alpha
Helix 19	AC1	A	599	609	Right-handed alpha
Helix 20	AC2	A	612	627	Right-handed alpha
Helix 21	AC3	A	648	653	Right-handed 310
Helix 22	AC4	A	665	678	Right-handed alpha
Helix 23	AC5	A	680	692	Right-handed alpha
Helix 24	AC6	A	693	698	Right-handed 310
Helix 25	AC7	A	699	704	Right-handed alpha
Helix 26	AC8	A	732	743	Right-handed alpha
Helix 27	AC9	A	811	813	Right-handed 310
Helix 28	AD1	B	179	185	Right-handed alpha
Helix 29	AD2	B	186	191	Right-handed alpha
Helix 30	AD3	B	209	214	Right-handed 310
Helix 31	AD4	B	244	249	Right-handed alpha
Helix 32	AD5	B	257	262	Right-handed alpha
Helix 33	AD6	B	301	312	Right-handed alpha
Helix 34	AD7	B	314	335	Right-handed alpha
Helix 35	AD8	B	343	352	Right-handed alpha
Helix 36	AD9	B	352	365	Right-handed alpha
Helix 37	AE1	B	381	390	Right-handed alpha
Helix 38	AE2	B	395	409	Right-handed alpha
Helix 39	AE3	B	434	442	Right-handed alpha
Helix 40	AE4	B	449	452	Right-handed 310
Helix 41	AE5	B	453	466	Right-handed alpha
Helix 42	AE6	B	467	472	Right-handed 310
Helix 43	AE7	B	485	498	Right-handed alpha
Helix 44	AE8	B	526	546	Right-handed alpha
Helix 45	AE9	B	548	570	Right-handed alpha
Helix 46	AF1	B	599	609	Right-handed alpha
Helix 47	AF2	B	612	627	Right-handed alpha
Helix 48	AF3	B	648	653	Right-handed 310
Helix 49	AF4	B	665	678	Right-handed alpha
Helix 50	AF5	B	680	692	Right-handed alpha
Helix 51	AF6	B	693	698	Right-handed 310
Helix 52	AF7	B	699	704	Right-handed alpha
Helix 53	AF8	B	732	743	Right-handed alpha
Helix 54	AF9	B	811	813	Right-handed 310

There are 22 sheets in PDB entry 8BOU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	24	27	first strand
Strand 2	A	32	35	anti-parallel
Strand 3	A	115	122	anti-parallel
Strand 4	A	125	132	anti-parallel
Strand 5	A	135	142	anti-parallel
Strand 6	A	149	158	anti-parallel
Strand 7	A	290	298	anti-parallel
Strand 8	A	226	233	anti-parallel
Strand 9	A	202	207	anti-parallel
Strand 10	A	194	198	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	45	49	first strand
Strand 2	A	53	58	anti-parallel
Strand 3	A	63	67	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	100	102	first strand
Strand 2	A	89	94	anti-parallel
Strand 3	A	164	172	anti-parallel
Strand 4	A	275	285	anti-parallel
Strand 5	A	239	243	anti-parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	337	340	first strand
Strand 2	A	767	774	anti-parallel
Strand 3	A	777	784	anti-parallel
Strand 4	A	816	822	parallel
Strand 5	A	795	798	anti-parallel
Strand 6	A	801	802	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	378	380	first strand
Strand 2	A	419	421	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	474	476	first strand
Strand 2	A	482	484	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	524	525	first strand
Strand 2	A	579	580	anti-parallel
Strand 3	A	586	587	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	597	598	first strand
Strand 2	A	636	637	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	628	629	first strand
Strand 2	A	632	633	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	663	664	first strand
Strand 2	A	711	714	anti-parallel
Strand 3	A	725	728	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	748	751	first strand
Strand 2	A	754	757	anti-parallel
Strand 3	A	807	809	anti-parallel

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There are 10 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	24	27	first strand
Strand 2	B	32	35	anti-parallel
Strand 3	B	116	122	anti-parallel
Strand 4	B	125	132	anti-parallel
Strand 5	B	135	142	anti-parallel
Strand 6	B	149	158	anti-parallel
Strand 7	B	290	298	anti-parallel
Strand 8	B	226	233	anti-parallel
Strand 9	B	202	207	anti-parallel
Strand 10	B	194	198	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	45	49	first strand
Strand 2	B	54	58	anti-parallel
Strand 3	B	63	66	anti-parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	100	102	first strand
Strand 2	B	89	94	anti-parallel
Strand 3	B	164	172	anti-parallel
Strand 4	B	275	285	anti-parallel
Strand 5	B	239	243	anti-parallel

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There are 6 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	337	340	first strand
Strand 2	B	767	774	anti-parallel
Strand 3	B	777	784	anti-parallel
Strand 4	B	816	822	parallel
Strand 5	B	795	798	anti-parallel
Strand 6	B	801	802	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	378	380	first strand
Strand 2	B	419	421	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	474	476	first strand
Strand 2	B	482	484	anti-parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	524	525	first strand
Strand 2	B	579	580	anti-parallel
Strand 3	B	586	587	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	597	598	first strand
Strand 2	B	636	637	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	628	629	first strand
Strand 2	B	632	633	anti-parallel

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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	663	664	first strand
Strand 2	B	711	714	anti-parallel
Strand 3	B	725	728	anti-parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	748	751	first strand
Strand 2	B	754	757	anti-parallel
Strand 3	B	807	809	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8BOU

Analysis of interatomic Contacts of Structural Units in PDB entry:
8BOU