Analysis of interatomic Contacts of Structural Units in PDB entry:
8BS0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8BS0 entry

There are 2 chains in PDB entry 8BS0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 4SER 397
B
 GLU 4ILE 231
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 8BS0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
6 24Right-handed alpha
Helix 2
AA2
A
24 30Right-handed alpha
Helix 3
AA3
A
58 75Right-handed alpha
Helix 4
AA4
A
78 96Right-handed alpha
Helix 5
AA5
A
120 138Right-handed alpha
Helix 6
AA6
A
139 159Right-handed alpha
Helix 7
AA7
A
176 193Right-handed alpha
Helix 8
AA8
A
197 213Right-handed alpha
Helix 9
AA9
A
234 238Right-handed alpha
Helix 10
AB1
A
241 259Right-handed alpha
Helix 11
AB2
A
262 281Right-handed alpha
Helix 12
AB3
A
309 327Right-handed alpha
Helix 13
AB4
A
328 347Right-handed alpha
Helix 14
AB5
A
377 397Right-handed alpha
Helix 15
AB6
B
6 24Right-handed alpha
Helix 16
AB7
B
24 30Right-handed alpha
Helix 17
AB8
B
58 75Right-handed alpha
Helix 18
AB9
B
78 96Right-handed alpha
Helix 19
AC1
B
120 138Right-handed alpha
Helix 20
AC2
B
139 159Right-handed alpha
Helix 21
AC3
B
176 193Right-handed alpha
Helix 22
AC4
B
197 213Right-handed alpha
Helix 23
AC5
B
234 238Right-handed alpha
Helix 24
AC6
B
241 259Right-handed alpha
Helix 25
AC7
B
262 281Right-handed alpha
Helix 26
AC8
B
309 327Right-handed alpha
Helix 27
AC9
B
328 346Right-handed alpha
Helix 28
AD1
B
377 396Right-handed alpha
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There are 10 sheets in PDB entry 8BS0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
56 57first strand
Strand 2
A
106 107anti-parallel
Strand 3
A
113 115anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
174 175first strand
Strand 2
A
224 225anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
214 215first strand
Strand 2
A
220 221anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
239 240first strand
Strand 2
A
292 293anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
307 308first strand
Strand 2
A
357 358anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
56 57first strand
Strand 2
B
106 107anti-parallel
Strand 3
B
113 115anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
174 175first strand
Strand 2
B
224 225anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
214 215first strand
Strand 2
B
220 221anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
239 240first strand
Strand 2
B
292 293anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
307 308first strand
Strand 2
B
357 358anti-parallel
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