Analysis of interatomic Contacts of Structural Units in PDB entry:
8BSH

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8BSH entry

There are 3 chains in PDB entry 8BSH (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	ALA 768
C	ARG 133	LYS 926
B	GLY 24	ILE 190

There are 60 helices in PDB entry 8BSH. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	3	11	Right-handed alpha
Helix 2	AA2	A	22	29	Right-handed alpha
Helix 3	AA3	A	90	94	Right-handed 310
Helix 4	AA4	A	97	101	Right-handed 310
Helix 5	AA5	A	102	106	Right-handed 310
Helix 6	AA6	A	133	149	Right-handed alpha
Helix 7	AA7	A	189	199	Right-handed alpha
Helix 8	AA8	A	207	218	Right-handed alpha
Helix 9	AA9	A	223	228	Right-handed 310
Helix 10	AB1	A	231	244	Right-handed alpha
Helix 11	AB2	A	261	277	Right-handed alpha
Helix 12	AB3	A	310	317	Right-handed alpha
Helix 13	AB4	A	322	339	Right-handed alpha
Helix 14	AB5	A	354	364	Right-handed alpha
Helix 15	AB6	A	377	386	Right-handed alpha
Helix 16	AB7	A	516	521	Right-handed alpha
Helix 17	AB8	A	524	540	Right-handed alpha
Helix 18	AB9	A	544	562	Right-handed alpha
Helix 19	AC1	A	570	574	Right-handed 310
Helix 20	AC2	A	581	588	Right-handed alpha
Helix 21	AC3	A	602	616	Right-handed alpha
Helix 22	AC4	A	617	626	Right-handed alpha
Helix 23	AC5	A	644	648	Right-handed 310
Helix 24	AC6	A	667	676	Right-handed alpha
Helix 25	AC7	A	677	681	Right-handed 310
Helix 26	AC8	A	684	702	Right-handed alpha
Helix 27	AC9	A	721	728	Right-handed alpha
Helix 28	AD1	A	751	765	Right-handed alpha
Helix 29	AD2	C	151	156	Right-handed alpha
Helix 30	AD3	C	192	200	Right-handed alpha
Helix 31	AD4	C	263	270	Right-handed 310
Helix 32	AD5	C	275	279	Right-handed 310
Helix 33	AD6	C	280	285	Right-handed alpha
Helix 34	AD7	C	313	319	Right-handed alpha
Helix 35	AD8	C	320	331	Right-handed alpha
Helix 36	AD9	C	332	336	Right-handed 310
Helix 37	AE1	C	361	366	Right-handed 310
Helix 38	AE2	C	399	414	Right-handed alpha
Helix 39	AE3	C	423	435	Right-handed alpha
Helix 40	AE4	C	470	475	Right-handed alpha
Helix 41	AE5	C	481	493	Right-handed alpha
Helix 42	AE6	C	508	519	Right-handed alpha
Helix 43	AE7	C	533	549	Right-handed alpha
Helix 44	AE8	C	638	646	Right-handed alpha
Helix 45	AE9	C	649	666	Right-handed alpha
Helix 46	AF1	C	667	690	Right-handed alpha
Helix 47	AF2	C	709	719	Right-handed alpha
Helix 48	AF3	C	729	740	Right-handed alpha
Helix 49	AF4	C	744	753	Right-handed alpha
Helix 50	AF5	C	817	825	Right-handed alpha
Helix 51	AF6	C	846	861	Right-handed alpha
Helix 52	AF7	C	887	900	Right-handed alpha
Helix 53	AF8	C	912	925	Right-handed alpha
Helix 54	AF9	B	36	46	Right-handed alpha
Helix 55	AG1	B	78	87	Right-handed 310
Helix 56	AG2	B	102	104	Right-handed 310
Helix 57	AG3	B	105	118	Right-handed alpha
Helix 58	AG4	B	119	123	Right-handed 310
Helix 59	AG5	B	141	150	Right-handed alpha
Helix 60	AG6	B	179	187	Right-handed alpha

There are 17 sheets in PDB entry 8BSH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	12	14	first strand
Strand 2	A	34	37	anti-parallel
Strand 3	A	456	459	anti-parallel
Strand 4	A	416	418	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	18	19	first strand
Strand 2	A	499	511	parallel
Strand 3	A	109	112	anti-parallel
Strand 4	A	48	49	parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	18	19	first strand
Strand 2	A	499	511	parallel
Strand 3	A	484	495	anti-parallel
Strand 4	A	399	408	anti-parallel
Strand 5	A	444	450	anti-parallel
Strand 6	A	422	423	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	70	72	first strand
Strand 2	A	77	79	anti-parallel
Strand 3	A	86	87	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	229	230	first strand
Strand 2	A	156	162	anti-parallel
Strand 3	A	123	129	parallel
Strand 4	A	283	288	parallel
Strand 5	A	342	348	parallel
Strand 6	A	371	372	parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	229	230	first strand
Strand 2	A	156	162	anti-parallel
Strand 3	A	166	169	anti-parallel
Strand 4	A	177	182	anti-parallel
Strand 5	C	374	378	parallel
Strand 6	C	354	358	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	628	632	first strand
Strand 2	A	653	657	anti-parallel
Strand 3	A	661	666	anti-parallel
Strand 4	A	710	715	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	141	142	first strand
Strand 2	C	702	703	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	182	184	first strand
Strand 2	C	204	207	anti-parallel
Strand 3	C	594	600	anti-parallel
Strand 4	C	566	572	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	189	190	first strand
Strand 2	C	623	636	parallel
Strand 3	C	287	291	anti-parallel
Strand 4	C	222	223	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	189	190	first strand
Strand 2	C	623	636	parallel
Strand 3	C	608	619	anti-parallel
Strand 4	C	553	562	anti-parallel
Strand 5	C	583	585	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	243	245	first strand
Strand 2	C	250	252	anti-parallel
Strand 3	C	259	261	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	394	395	first strand
Strand 2	C	344	350	anti-parallel
Strand 3	C	305	311	parallel
Strand 4	C	441	445	parallel
Strand 5	C	496	499	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	502	503	first strand
Strand 2	C	526	527	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	755	758	first strand
Strand 2	C	800	803	anti-parallel
Strand 3	C	807	812	anti-parallel
Strand 4	C	870	875	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	769	771	first strand
Strand 2	C	777	781	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	58	62	first strand
Strand 2	B	69	73	anti-parallel
Strand 3	B	25	28	parallel
Strand 4	B	93	96	parallel
Strand 5	B	128	129	parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8BSH

Analysis of interatomic Contacts of Structural Units in PDB entry:
8BSH