Analysis of interatomic Contacts of Structural Units in PDB entry:
8BSS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8BSS entry

There are 7 chains in PDB entry 8BSS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 28ARG 159
B
 VAL 206VAL 206
B
 ILE 208TYR 210
B
 ASN 212ARG 213
B
 THR 215THR 215
B
 LYS 217CYS 218
B
 TYR 221TYR 221
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There is 1 helix in PDB entry 8BSS. Click on helix number for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
79 83Right-handed 310
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There are 2 sheets in PDB entry 8BSS. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
135 142first strand
Strand 2
A
122 130anti-parallel
Strand 3
A
103 108anti-parallel
Strand 4
A
94 99anti-parallel
Strand 5
A
65 75anti-parallel
Strand 6
A
51 62anti-parallel
Strand 7
A
36 40anti-parallel
Strand 8
B
208 212parallel
Strand 9
B
218 220anti-parallel
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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
135 142first strand
Strand 2
A
122 130anti-parallel
Strand 3
A
111 115anti-parallel
Strand 4
A
85 89anti-parallel
Strand 5
A
65 75anti-parallel
Strand 6
A
51 62anti-parallel
Strand 7
A
36 40anti-parallel
Strand 8
B
208 212parallel
Strand 9
B
218 220anti-parallel
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