Analysis of interatomic Contacts of Structural Units in PDB entry:
8BST

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8BST entry

There are 4 chains in PDB entry 8BST (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ARG 434	CYS 805
B	ARG 434	PRO 806
C	ARG 434	TRP 800
D	SER 435	ARG 801

There are 48 helices in PDB entry 8BST. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	457	460	Right-handed 310
Helix 2	AA2	A	464	478	Right-handed alpha
Helix 3	AA3	A	501	509	Right-handed alpha
Helix 4	AA4	A	522	527	Right-handed alpha
Helix 5	AA5	A	672	678	Right-handed alpha
Helix 6	AA6	A	690	699	Right-handed alpha
Helix 7	AA7	A	701	714	Right-handed alpha
Helix 8	AA8	A	715	718	Right-handed 310
Helix 9	AA9	A	721	732	Right-handed alpha
Helix 10	AB1	A	740	748	Right-handed alpha
Helix 11	AB2	A	774	789	Right-handed alpha
Helix 12	AB3	A	790	801	Right-handed alpha
Helix 13	AB4	B	457	460	Right-handed 310
Helix 14	AB5	B	464	478	Right-handed alpha
Helix 15	AB6	B	501	509	Right-handed alpha
Helix 16	AB7	B	522	527	Right-handed alpha
Helix 17	AB8	B	672	678	Right-handed alpha
Helix 18	AB9	B	690	698	Right-handed alpha
Helix 19	AC1	B	701	714	Right-handed alpha
Helix 20	AC2	B	715	718	Right-handed 310
Helix 21	AC3	B	721	732	Right-handed alpha
Helix 22	AC4	B	740	748	Right-handed alpha
Helix 23	AC5	B	774	789	Right-handed alpha
Helix 24	AC6	B	790	800	Right-handed alpha
Helix 25	AC7	C	457	460	Right-handed 310
Helix 26	AC8	C	464	478	Right-handed alpha
Helix 27	AC9	C	501	509	Right-handed alpha
Helix 28	AD1	C	522	527	Right-handed alpha
Helix 29	AD2	C	672	678	Right-handed alpha
Helix 30	AD3	C	690	699	Right-handed alpha
Helix 31	AD4	C	701	714	Right-handed alpha
Helix 32	AD5	C	715	718	Right-handed 310
Helix 33	AD6	C	721	732	Right-handed alpha
Helix 34	AD7	C	740	748	Right-handed alpha
Helix 35	AD8	C	774	789	Right-handed alpha
Helix 36	AD9	C	790	800	Right-handed alpha
Helix 37	AE1	D	457	460	Right-handed 310
Helix 38	AE2	D	464	478	Right-handed alpha
Helix 39	AE3	D	501	509	Right-handed alpha
Helix 40	AE4	D	522	529	Right-handed alpha
Helix 41	AE5	D	672	678	Right-handed alpha
Helix 42	AE6	D	690	698	Right-handed alpha
Helix 43	AE7	D	701	714	Right-handed alpha
Helix 44	AE8	D	715	718	Right-handed 310
Helix 45	AE9	D	721	732	Right-handed alpha
Helix 46	AF1	D	740	748	Right-handed alpha
Helix 47	AF2	D	774	789	Right-handed alpha
Helix 48	AF3	D	790	800	Right-handed alpha

There are 16 sheets in PDB entry 8BST. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	481	485	first strand
Strand 2	A	436	440	parallel
Strand 3	A	514	520	parallel
Strand 4	A	763	769	anti-parallel
Strand 5	A	530	531	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	481	485	first strand
Strand 2	A	436	440	parallel
Strand 3	A	514	520	parallel
Strand 4	A	763	769	anti-parallel
Strand 5	A	536	538	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	448	449	first strand
Strand 2	A	462	463	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	683	685	first strand
Strand 2	A	734	739	parallel
Strand 3	A	540	545	anti-parallel
Strand 4	A	753	756	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	481	485	first strand
Strand 2	B	436	440	parallel
Strand 3	B	514	520	parallel
Strand 4	B	763	769	anti-parallel
Strand 5	B	530	531	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	481	485	first strand
Strand 2	B	436	440	parallel
Strand 3	B	514	520	parallel
Strand 4	B	763	769	anti-parallel
Strand 5	B	536	538	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	448	449	first strand
Strand 2	B	462	463	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	683	685	first strand
Strand 2	B	734	739	parallel
Strand 3	B	540	545	anti-parallel
Strand 4	B	753	756	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	480	485	first strand
Strand 2	C	435	440	parallel
Strand 3	C	514	520	parallel
Strand 4	C	763	769	anti-parallel
Strand 5	C	530	531	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	480	485	first strand
Strand 2	C	435	440	parallel
Strand 3	C	514	520	parallel
Strand 4	C	763	769	anti-parallel
Strand 5	C	536	538	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	448	449	first strand
Strand 2	C	462	463	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	683	685	first strand
Strand 2	C	734	739	parallel
Strand 3	C	540	544	anti-parallel
Strand 4	C	754	756	anti-parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	481	485	first strand
Strand 2	D	436	440	parallel
Strand 3	D	514	520	parallel
Strand 4	D	763	769	anti-parallel
Strand 5	D	530	531	anti-parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	481	485	first strand
Strand 2	D	436	440	parallel
Strand 3	D	514	520	parallel
Strand 4	D	763	769	anti-parallel
Strand 5	D	536	538	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	448	449	first strand
Strand 2	D	462	463	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	683	686	first strand
Strand 2	D	734	739	parallel
Strand 3	D	540	545	anti-parallel
Strand 4	D	753	756	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8BST

Analysis of interatomic Contacts of Structural Units in PDB entry:
8BST