Analysis of interatomic Contacts of Structural Units in PDB entry:
8BTL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8BTL entry

There are 3 chains in PDB entry 8BTL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 4830PRO 5183
C
 GLY -1ASP 151
D
 SER 2ASP 151
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 8BTL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
4888 4897Right-handed alpha
Helix 2
AA2
A
4902 4907Right-handed alpha
Helix 3
AA3
A
4908 4912Right-handed 310
Helix 4
AA4
A
4928 4948Right-handed alpha
Helix 5
AA5
A
4953 4970Right-handed alpha
Helix 6
AA6
A
4982 5004Right-handed alpha
Helix 7
AA7
A
5006 5019Right-handed alpha
Helix 8
AA8
A
5023 5029Right-handed alpha
Helix 9
AA9
A
5034 5046Right-handed alpha
Helix 10
AB1
A
5047 5072Right-handed alpha
Helix 11
AB2
A
5086 5107Right-handed alpha
Helix 12
AB3
A
5118 5130Right-handed alpha
Helix 13
AB4
A
5130 5148Right-handed alpha
Helix 14
AB5
A
5154 5163Right-handed alpha
Helix 15
AB6
A
5164 5167Right-handed 310
Helix 16
AB7
A
5170 5182Right-handed alpha
Helix 17
AB8
C
3 19Right-handed alpha
Helix 18
AB9
C
101 115Right-handed alpha
Helix 19
AC1
C
123 132Right-handed alpha
Helix 20
AC2
C
133 148Right-handed alpha
Helix 21
AC3
D
3 19Right-handed alpha
Helix 22
AC4
D
89 93Right-handed 310
Helix 23
AC5
D
101 115Right-handed alpha
Helix 24
AC6
D
123 133Right-handed alpha
Helix 25
AC7
D
133 148Right-handed alpha
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There are 3 sheets in PDB entry 8BTL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4875 4887first strand
Strand 2
A
4853 4863anti-parallel
Strand 3
A
4918 4922anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
24 28first strand
Strand 2
C
35 41anti-parallel
Strand 3
C
52 58anti-parallel
Strand 4
C
69 72anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
24 28first strand
Strand 2
D
35 41anti-parallel
Strand 3
D
52 58anti-parallel
Strand 4
D
69 72anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il