Analysis of interatomic Contacts of Structural Units in PDB entry:
8BUZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8BUZ entry

There are 2 chains in PDB entry 8BUZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 165ILE 1167
B
 VAL 36GLN 390
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 45 helices in PDB entry 8BUZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
165 206Right-handed alpha
Helix 2
AA2
A
211 238Right-handed alpha
Helix 3
AA3
A
241 264Right-handed alpha
Helix 4
AA4
A
272 286Right-handed alpha
Helix 5
AA5
A
290 312Right-handed alpha
Helix 6
AA6
A
312 319Right-handed alpha
Helix 7
AA7
A
322 377Right-handed alpha
Helix 8
AA8
A
381 393Right-handed alpha
Helix 9
AA9
A
424 430Right-handed alpha
Helix 10
AB1
A
433 455Right-handed alpha
Helix 11
AB2
A
479 499Right-handed alpha
Helix 12
AB3
A
500 503Right-handed 310
Helix 13
AB4
A
533 546Right-handed alpha
Helix 14
AB5
A
554 562Right-handed alpha
Helix 15
AB6
A
672 685Right-handed alpha
Helix 16
AB7
A
686 688Right-handed 310
Helix 17
AB8
A
699 708Right-handed alpha
Helix 18
AB9
A
713 734Right-handed alpha
Helix 19
AC1
A
739 762Right-handed alpha
Helix 20
AC2
A
770 783Right-handed alpha
Helix 21
AC3
A
783 809Right-handed alpha
Helix 22
AC4
A
834 852Right-handed alpha
Helix 23
AC5
A
856 876Right-handed alpha
Helix 24
AC6
A
879 891Right-handed alpha
Helix 25
AC7
A
894 898Right-handed 310
Helix 26
AC8
A
899 957Right-handed alpha
Helix 27
AC9
A
958 967Right-handed alpha
Helix 28
AD1
A
991 997Right-handed alpha
Helix 29
AD2
A
1006 1025Right-handed alpha
Helix 30
AD3
A
1059 1083Right-handed alpha
Helix 31
AD4
A
1114 1126Right-handed alpha
Helix 32
AD5
B
52 64Right-handed alpha
Helix 33
AD6
B
89 113Right-handed alpha
Helix 34
AD7
B
125 137Right-handed alpha
Helix 35
AD8
B
143 156Right-handed alpha
Helix 36
AD9
B
156 165Right-handed alpha
Helix 37
AE1
B
174 180Right-handed alpha
Helix 38
AE2
B
181 187Right-handed alpha
Helix 39
AE3
B
193 199Right-handed alpha
Helix 40
AE4
B
230 238Right-handed 310
Helix 41
AE5
B
264 278Right-handed alpha
Helix 42
AE6
B
293 304Right-handed alpha
Helix 43
AE7
B
313 318Right-handed alpha
Helix 44
AE8
B
331 352Right-handed alpha
Helix 45
AE9
B
368 388Right-handed alpha
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There are 6 sheets in PDB entry 8BUZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
410 417first strand
Strand 2
A
513 520anti-parallel
Strand 3
A
530 532anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
420 422first strand
Strand 2
A
508 510anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
462 463first strand
Strand 2
A
466 467anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
976 979first strand
Strand 2
A
1099 1102anti-parallel
Strand 3
A
1110 1113anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1032 1038first strand
Strand 2
A
1041 1046anti-parallel
Strand 3
A
983 989anti-parallel
Strand 4
A
1090 1096anti-parallel
Strand 5
A
1132 1133parallel
Strand 6
A
1162 1163anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
208 214first strand
Strand 2
B
217 223anti-parallel
Strand 3
B
41 45parallel
Strand 4
B
243 249parallel
Strand 5
B
288 292parallel
Strand 6
B
360 363parallel
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