Analysis of interatomic Contacts of Structural Units in PDB entry:
8BV0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8BV0 entry

There are 4 chains in PDB entry 8BV0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 153GLU 494
B
 GLU 18ILE 223
C
 GLU 153GLU 494
D
 GLU 18ILE 223
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 43 helices in PDB entry 8BV0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
153 157Right-handed 310
Helix 2
AA2
A
160 173Right-handed alpha
Helix 3
AA3
A
190 200Right-handed alpha
Helix 4
AA4
A
201 208Right-handed alpha
Helix 5
AA5
A
221 234Right-handed alpha
Helix 6
AA6
A
237 241Right-handed 310
Helix 7
AA7
A
244 259Right-handed alpha
Helix 8
AA8
A
271 279Right-handed alpha
Helix 9
AA9
A
280 282Right-handed 310
Helix 10
AB1
A
297 305Right-handed alpha
Helix 11
AB2
A
315 328Right-handed alpha
Helix 12
AB3
A
334 336Right-handed 310
Helix 13
AB4
A
337 348Right-handed alpha
Helix 14
AB5
A
351 365Right-handed alpha
Helix 15
AB6
A
368 379Right-handed alpha
Helix 16
AB7
A
392 401Right-handed alpha
Helix 17
AB8
A
404 413Right-handed alpha
Helix 18
AB9
A
414 417Right-handed 310
Helix 19
AC1
A
425 436Right-handed alpha
Helix 20
AC2
A
445 460Right-handed alpha
Helix 21
AC3
A
480 492Right-handed alpha
Helix 22
AC4
B
32 42Right-handed alpha
Helix 23
AC5
C
153 157Right-handed 310
Helix 24
AC6
C
160 173Right-handed alpha
Helix 25
AC7
C
190 200Right-handed alpha
Helix 26
AC8
C
201 208Right-handed alpha
Helix 27
AC9
C
221 234Right-handed alpha
Helix 28
AD1
C
237 241Right-handed 310
Helix 29
AD2
C
244 259Right-handed alpha
Helix 30
AD3
C
271 279Right-handed alpha
Helix 31
AD4
C
280 282Right-handed 310
Helix 32
AD5
C
297 305Right-handed alpha
Helix 33
AD6
C
315 328Right-handed alpha
Helix 34
AD7
C
334 348Right-handed alpha
Helix 35
AD8
C
351 365Right-handed alpha
Helix 36
AD9
C
368 379Right-handed alpha
Helix 37
AE1
C
392 401Right-handed alpha
Helix 38
AE2
C
404 413Right-handed alpha
Helix 39
AE3
C
414 417Right-handed 310
Helix 40
AE4
C
425 436Right-handed alpha
Helix 41
AE5
C
445 460Right-handed alpha
Helix 42
AE6
C
480 492Right-handed alpha
Helix 43
AE7
D
32 42Right-handed alpha
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There are 8 sheets in PDB entry 8BV0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
210 215first strand
Strand 2
A
262 269parallel
Strand 3
A
290 295parallel
Strand 4
A
179 184parallel
Strand 5
A
309 310parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
423 424first strand
Strand 2
A
474 478anti-parallel
Strand 3
A
464 468anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
49 51first strand
Strand 2
B
58 61anti-parallel
Strand 3
B
205 209anti-parallel
Strand 4
B
84 92anti-parallel
Strand 5
B
158 164anti-parallel
Strand 6
B
170 174anti-parallel
Strand 7
B
177 178anti-parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
69 72first strand
Strand 2
B
193 199anti-parallel
Strand 3
B
99 104anti-parallel
Strand 4
B
121 124anti-parallel
Strand 5
B
128 130anti-parallel
Strand 6
B
145 148anti-parallel
Strand 7
B
138 139anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
210 215first strand
Strand 2
C
262 269parallel
Strand 3
C
290 295parallel
Strand 4
C
179 184parallel
Strand 5
C
309 310parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
423 424first strand
Strand 2
C
474 478anti-parallel
Strand 3
C
464 468anti-parallel
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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
49 51first strand
Strand 2
D
58 61anti-parallel
Strand 3
D
205 209anti-parallel
Strand 4
D
84 92anti-parallel
Strand 5
D
158 164anti-parallel
Strand 6
D
170 174anti-parallel
Strand 7
D
177 178anti-parallel
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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
69 72first strand
Strand 2
D
193 199anti-parallel
Strand 3
D
99 104anti-parallel
Strand 4
D
121 124anti-parallel
Strand 5
D
128 130anti-parallel
Strand 6
D
145 148anti-parallel
Strand 7
D
138 139anti-parallel
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