Analysis of interatomic Contacts of Structural Units in PDB entry:
8BV8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8BV8 entry

There are 2 chains in PDB entry 8BV8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 20LYS 241
B
 LEU 20LYS 241
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 8BV8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
46 58Right-handed alpha
Helix 2
AA2
A
90 92Right-handed 310
Helix 3
AA3
A
93 98Right-handed alpha
Helix 4
AA4
A
121 138Right-handed alpha
Helix 5
AA5
A
153 162Right-handed alpha
Helix 6
AA6
A
184 189Right-handed alpha
Helix 7
AA7
A
190 193Right-handed 310
Helix 8
AA8
A
194 203Right-handed alpha
Helix 9
AA9
A
222 229Right-handed 310
Helix 10
AB1
B
46 58Right-handed alpha
Helix 11
AB2
B
90 92Right-handed 310
Helix 12
AB3
B
93 98Right-handed alpha
Helix 13
AB4
B
121 138Right-handed alpha
Helix 14
AB5
B
152 162Right-handed alpha
Helix 15
AB6
B
222 229Right-handed 310
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There are 2 sheets in PDB entry 8BV8. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
24 28first strand
Strand 2
A
31 36anti-parallel
Strand 3
A
41 44anti-parallel
Strand 4
A
67 75anti-parallel
Strand 5
A
78 86anti-parallel
Strand 6
A
106 114anti-parallel
Strand 7
A
143 148parallel
Strand 8
A
208 220anti-parallel
Strand 9
A
165 177anti-parallel
Strand 10
A
180 183anti-parallel
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There are 10 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
24 28first strand
Strand 2
B
31 36anti-parallel
Strand 3
B
41 44anti-parallel
Strand 4
B
67 75anti-parallel
Strand 5
B
78 86anti-parallel
Strand 6
B
106 114anti-parallel
Strand 7
B
143 149parallel
Strand 8
B
208 220anti-parallel
Strand 9
B
165 177anti-parallel
Strand 10
B
180 183anti-parallel
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