Analysis of interatomic Contacts of Structural Units in PDB entry:
8BVI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8BVI entry

There is 1 chain in PDB entry 8BVI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 7PRO 305
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 8BVI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
31 35Right-handed 310
Helix 2
AA2
A
38 43Right-handed alpha
Helix 3
AA3
A
50 58Right-handed alpha
Helix 4
AA4
A
64 79Right-handed alpha
Helix 5
AA5
A
83 92Right-handed alpha
Helix 6
AA6
A
100 111Right-handed alpha
Helix 7
AA7
A
147 155Right-handed alpha
Helix 8
AA8
A
170 178Right-handed alpha
Helix 9
AA9
A
201 211Right-handed alpha
Helix 10
AB1
A
253 263Right-handed alpha
Helix 11
AB2
A
266 270Right-handed 310
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There are 2 sheets in PDB entry 8BVI. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
96 97first strand
Strand 2
A
272 284anti-parallel
Strand 3
A
291 302anti-parallel
Strand 4
A
219 225anti-parallel
Strand 5
A
189 193parallel
Strand 6
A
119 123parallel
Strand 7
A
140 144parallel
Strand 8
A
161 163parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
233 235first strand
Strand 2
A
238 239anti-parallel
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