Analysis of interatomic Contacts of Structural Units in PDB entry:
8BWQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8BWQ entry

There is 1 chain in PDB entry 8BWQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 7LYS 1294
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 56 helices in PDB entry 8BWQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
11 15Right-handed 310
Helix 2
AA2
A
17 22Right-handed alpha
Helix 3
AA3
A
24 26Right-handed 310
Helix 4
AA4
A
27 37Right-handed alpha
Helix 5
AA5
A
48 51Right-handed 310
Helix 6
AA6
A
52 74Right-handed alpha
Helix 7
AA7
A
79 122Right-handed alpha
Helix 8
AA8
A
127 150Right-handed alpha
Helix 9
AA9
A
150 181Right-handed alpha
Helix 10
AB1
A
182 188Right-handed alpha
Helix 11
AB2
A
190 200Right-handed alpha
Helix 12
AB3
A
203 210Right-handed alpha
Helix 13
AB4
A
213 234Right-handed alpha
Helix 14
AB5
A
235 290Right-handed alpha
Helix 15
AB6
A
291 342Right-handed alpha
Helix 16
AB7
A
347 367Right-handed alpha
Helix 17
AB8
A
367 391Right-handed alpha
Helix 18
AB9
A
452 459Right-handed alpha
Helix 19
AC1
A
488 495Right-handed alpha
Helix 20
AC2
A
500 511Right-handed alpha
Helix 21
AC3
A
512 522Right-handed alpha
Helix 22
AC4
A
529 533Right-handed 310
Helix 23
AC5
A
536 552Right-handed alpha
Helix 24
AC6
A
567 576Right-handed alpha
Helix 25
AC7
A
576 581Right-handed alpha
Helix 26
AC8
A
582 585Right-handed 310
Helix 27
AC9
A
593 600Right-handed 310
Helix 28
AD1
A
616 620Right-handed 310
Helix 29
AD2
A
697 707Right-handed alpha
Helix 30
AD3
A
710 745Right-handed alpha
Helix 31
AD4
A
760 807Right-handed alpha
Helix 32
AD5
A
809 816Right-handed alpha
Helix 33
AD6
A
817 827Right-handed alpha
Helix 34
AD7
A
827 835Right-handed alpha
Helix 35
AD8
A
835 861Right-handed alpha
Helix 36
AD9
A
864 910Right-handed alpha
Helix 37
AE1
A
910 917Right-handed alpha
Helix 38
AE2
A
919 970Right-handed alpha
Helix 39
AE3
A
975 1007Right-handed alpha
Helix 40
AE4
A
1007 1018Right-handed alpha
Helix 41
AE5
A
1082 1089Right-handed alpha
Helix 42
AE6
A
1106 1108Right-handed 310
Helix 43
AE7
A
1109 1115Right-handed alpha
Helix 44
AE8
A
1130 1136Right-handed alpha
Helix 45
AE9
A
1142 1153Right-handed alpha
Helix 46
AF1
A
1154 1159Right-handed 310
Helix 47
AF2
A
1164 1168Right-handed 310
Helix 48
AF3
A
1171 1175Right-handed 310
Helix 49
AF4
A
1178 1194Right-handed alpha
Helix 50
AF5
A
1203 1207Right-handed 310
Helix 51
AF6
A
1208 1223Right-handed alpha
Helix 52
AF7
A
1234 1238Right-handed 310
Helix 53
AF8
A
1257 1264Right-handed alpha
Helix 54
AF9
A
1267 1275Right-handed alpha
Helix 55
AG1
A
1276 1278Right-handed 310
Helix 56
AG2
A
1279 1291Right-handed alpha
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There are 4 sheets in PDB entry 8BWQ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
428 435first strand
Strand 2
A
410 417anti-parallel
Strand 3
A
466 471anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
475 478first strand
Strand 2
A
555 558parallel
Strand 3
A
586 589parallel
Strand 4
A
440 444parallel
Strand 5
A
602 607parallel
Strand 6
A
610 613anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1058 1065first strand
Strand 2
A
1041 1048anti-parallel
Strand 3
A
1095 1100anti-parallel
Strand 4
A
1103 1104anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1197 1201first strand
Strand 2
A
1227 1231parallel
Strand 3
A
1070 1075parallel
Strand 4
A
1243 1248parallel
Strand 5
A
1251 1256anti-parallel
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