Analysis of interatomic Contacts of Structural Units in PDB entry:
8BWR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8BWR entry

There is 1 chain in PDB entry 8BWR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 7LYS 1294
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 56 helices in PDB entry 8BWR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
11 15Right-handed 310
Helix 2
AA2
A
19 24Right-handed alpha
Helix 3
AA3
A
28 37Right-handed alpha
Helix 4
AA4
A
48 51Right-handed 310
Helix 5
AA5
A
52 74Right-handed alpha
Helix 6
AA6
A
79 122Right-handed alpha
Helix 7
AA7
A
128 150Right-handed alpha
Helix 8
AA8
A
151 180Right-handed alpha
Helix 9
AA9
A
182 188Right-handed alpha
Helix 10
AB1
A
190 200Right-handed alpha
Helix 11
AB2
A
203 210Right-handed alpha
Helix 12
AB3
A
213 234Right-handed alpha
Helix 13
AB4
A
236 290Right-handed alpha
Helix 14
AB5
A
291 342Right-handed alpha
Helix 15
AB6
A
347 367Right-handed alpha
Helix 16
AB7
A
367 391Right-handed alpha
Helix 17
AB8
A
449 452Right-handed 310
Helix 18
AB9
A
453 459Right-handed alpha
Helix 19
AC1
A
488 495Right-handed alpha
Helix 20
AC2
A
500 511Right-handed alpha
Helix 21
AC3
A
512 521Right-handed alpha
Helix 22
AC4
A
529 533Right-handed 310
Helix 23
AC5
A
536 552Right-handed alpha
Helix 24
AC6
A
562 566Right-handed 310
Helix 25
AC7
A
567 574Right-handed alpha
Helix 26
AC8
A
593 598Right-handed alpha
Helix 27
AC9
A
616 620Right-handed 310
Helix 28
AD1
A
697 707Right-handed alpha
Helix 29
AD2
A
712 745Right-handed alpha
Helix 30
AD3
A
760 808Right-handed alpha
Helix 31
AD4
A
809 816Right-handed alpha
Helix 32
AD5
A
817 827Right-handed alpha
Helix 33
AD6
A
827 835Right-handed alpha
Helix 34
AD7
A
835 861Right-handed alpha
Helix 35
AD8
A
864 910Right-handed alpha
Helix 36
AD9
A
910 917Right-handed alpha
Helix 37
AE1
A
919 970Right-handed alpha
Helix 38
AE2
A
975 1018Right-handed alpha
Helix 39
AE3
A
1034 1038Right-handed 310
Helix 40
AE4
A
1076 1089Right-handed alpha
Helix 41
AE5
A
1106 1108Right-handed 310
Helix 42
AE6
A
1109 1115Right-handed alpha
Helix 43
AE7
A
1130 1136Right-handed alpha
Helix 44
AE8
A
1142 1153Right-handed alpha
Helix 45
AE9
A
1155 1160Right-handed alpha
Helix 46
AF1
A
1164 1168Right-handed 310
Helix 47
AF2
A
1171 1175Right-handed 310
Helix 48
AF3
A
1178 1194Right-handed alpha
Helix 49
AF4
A
1202 1207Right-handed 310
Helix 50
AF5
A
1208 1223Right-handed alpha
Helix 51
AF6
A
1234 1238Right-handed 310
Helix 52
AF7
A
1248 1251Right-handed 310
Helix 53
AF8
A
1257 1264Right-handed alpha
Helix 54
AF9
A
1267 1275Right-handed alpha
Helix 55
AG1
A
1276 1278Right-handed 310
Helix 56
AG2
A
1279 1292Right-handed alpha
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There are 4 sheets in PDB entry 8BWR. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
431 435first strand
Strand 2
A
410 415anti-parallel
Strand 3
A
468 471anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
475 478first strand
Strand 2
A
555 558parallel
Strand 3
A
586 590parallel
Strand 4
A
439 444parallel
Strand 5
A
602 607parallel
Strand 6
A
610 615anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1056 1065first strand
Strand 2
A
1041 1049anti-parallel
Strand 3
A
1095 1100anti-parallel
Strand 4
A
1103 1104anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1117 1120first strand
Strand 2
A
1197 1200parallel
Strand 3
A
1227 1231parallel
Strand 4
A
1070 1074parallel
Strand 5
A
1243 1246parallel
Strand 6
A
1254 1256anti-parallel
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