Analysis of interatomic Contacts of Structural Units in PDB entry:
8BY6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8BY6 entry

There are 3 chains in PDB entry 8BY6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 25ALA 790
B
 GLY 4ASN 155
C
 GLU 572LYS 594
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 49 helices in PDB entry 8BY6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
25 38Right-handed alpha
Helix 2
AA2
A
45 60Right-handed alpha
Helix 3
AA3
A
61 63Right-handed 310
Helix 4
AA4
A
64 79Right-handed alpha
Helix 5
AA5
A
82 95Right-handed alpha
Helix 6
AA6
A
97 118Right-handed alpha
Helix 7
AA7
A
121 137Right-handed alpha
Helix 8
AA8
A
141 155Right-handed alpha
Helix 9
AA9
A
156 158Right-handed 310
Helix 10
AB1
A
162 205Right-handed alpha
Helix 11
AB2
A
210 215Right-handed alpha
Helix 12
AB3
A
227 242Right-handed alpha
Helix 13
AB4
A
251 255Right-handed 310
Helix 14
AB5
A
256 262Right-handed alpha
Helix 15
AB6
A
293 297Right-handed 310
Helix 16
AB7
A
308 325Right-handed alpha
Helix 17
AB8
A
328 338Right-handed alpha
Helix 18
AB9
A
346 361Right-handed alpha
Helix 19
AC1
A
368 383Right-handed alpha
Helix 20
AC2
A
386 401Right-handed alpha
Helix 21
AC3
A
402 405Right-handed 310
Helix 22
AC4
A
406 424Right-handed alpha
Helix 23
AC5
A
429 433Right-handed 310
Helix 24
AC6
A
434 439Right-handed alpha
Helix 25
AC7
A
443 459Right-handed alpha
Helix 26
AC8
A
461 467Right-handed alpha
Helix 27
AC9
A
470 477Right-handed 310
Helix 28
AD1
A
497 510Right-handed alpha
Helix 29
AD2
A
513 522Right-handed alpha
Helix 30
AD3
A
540 555Right-handed alpha
Helix 31
AD4
A
558 569Right-handed alpha
Helix 32
AD5
A
569 577Right-handed alpha
Helix 33
AD6
A
579 594Right-handed alpha
Helix 34
AD7
A
597 611Right-handed alpha
Helix 35
AD8
A
615 624Right-handed alpha
Helix 36
AD9
A
625 629Right-handed 310
Helix 37
AE1
A
634 676Right-handed alpha
Helix 38
AE2
A
687 732Right-handed alpha
Helix 39
AE3
A
737 754Right-handed alpha
Helix 40
AE4
A
754 769Right-handed alpha
Helix 41
AE5
A
775 789Right-handed alpha
Helix 42
AE6
B
6 11Right-handed alpha
Helix 43
AE7
B
28 39Right-handed alpha
Helix 44
AE8
B
52 62Right-handed alpha
Helix 45
AE9
B
90 101Right-handed alpha
Helix 46
AF1
B
133 139Right-handed alpha
Helix 47
AF2
B
143 147Right-handed 310
Helix 48
AF3
B
150 155Right-handed alpha
Helix 49
AF4
C
574 594Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 8BY6.

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
66 73first strand
Strand 2
B
80 88anti-parallel
Strand 3
B
41 45anti-parallel
Strand 4
B
112 115anti-parallel
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