Analysis of interatomic Contacts of Structural Units in PDB entry:
8BYX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8BYX entry

There are 12 chains in PDB entry 8BYX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
D
 G 1 C 18
E
 G 2 C 19
B
 GLY 216LYS 277
C
 G 1 C 18
F
 G 2 C 19
A
 LYS 219LYS 277
H
 G 1 C 18
I
 G 2 C 19
G
 ARG 217LYS 277
J
 ILE 221LYS 277
K
 ARG 217LYS 277
L
 ILE 221VAL 274
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 8BYX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
224 238Right-handed alpha
Helix 2
AA2
B
242 254Right-handed alpha
Helix 3
AA3
B
256 274Right-handed alpha
Helix 4
AA4
B
275 277Right-handed 310
Helix 5
AA5
A
224 238Right-handed alpha
Helix 6
AA6
A
242 253Right-handed alpha
Helix 7
AA7
A
256 276Right-handed alpha
Helix 8
AA8
G
224 238Right-handed alpha
Helix 9
AA9
G
242 253Right-handed alpha
Helix 10
AB1
G
256 273Right-handed alpha
Helix 11
AB2
G
274 277Right-handed 310
Helix 12
AB3
J
224 238Right-handed alpha
Helix 13
AB4
J
242 253Right-handed alpha
Helix 14
AB5
J
256 272Right-handed alpha
Helix 15
AB6
K
224 238Right-handed alpha
Helix 16
AB7
K
242 253Right-handed alpha
Helix 17
AB8
K
256 275Right-handed alpha
Helix 18
AB9
L
224 233Right-handed alpha
Helix 19
AC1
L
242 252Right-handed alpha
Helix 20
AC2
L
256 271Right-handed alpha
Helix 21
AC3
L
272 274Right-handed 310
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There are no sheets in PDB entry 8BYX
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