Analysis of interatomic Contacts of Structural Units in PDB entry:
8BZI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8BZI entry

There is 1 chain in PDB entry 8BZI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 26HIS 307
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 14 helices in PDB entry 8BZI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
31 35Right-handed alpha
Helix 2
AA2
A
75 88Right-handed alpha
Helix 3
AA3
A
120 124Right-handed 310
Helix 4
AA4
A
129 150Right-handed alpha
Helix 5
AA5
A
158 160Right-handed 310
Helix 6
AA6
A
199 204Right-handed alpha
Helix 7
AA7
A
210 227Right-handed alpha
Helix 8
AA8
A
235 246Right-handed alpha
Helix 9
AA9
A
256 267Right-handed alpha
Helix 10
AB1
A
270 274Right-handed 310
Helix 11
AB2
A
276 281Right-handed alpha
Helix 12
AB3
A
283 290Right-handed alpha
Helix 13
AB4
A
292 295Right-handed 310
Helix 14
AB5
A
296 307Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 8BZI. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
36 45first strand
Strand 2
A
48 55anti-parallel
Strand 3
A
61 68anti-parallel
Strand 4
A
106 112anti-parallel
Strand 5
A
97 103anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
117 118first strand
Strand 2
A
162 164anti-parallel
Strand 3
A
170 172anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il