Analysis of interatomic Contacts of Structural Units in PDB entry:
8BZM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8BZM entry

There are 10 chains in PDB entry 8BZM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
G
 T 1 T 17
A
 SER 304ARG 397
E
 SER 304ARG 398
F
 A 2 A 18
C
 A 1 A 18
D
 T 1 T 17
I
 SER 304LYS 396
J
 SER 304ARG 397
B
 ASN 206PRO 293
H
 ASN 206PRO 293
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 8BZM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
309 321Right-handed alpha
Helix 2
AA2
A
328 339Right-handed alpha
Helix 3
AA3
A
347 360Right-handed alpha
Helix 4
AA4
A
385 393Right-handed alpha
Helix 5
AA5
E
309 321Right-handed alpha
Helix 6
AA6
E
328 339Right-handed alpha
Helix 7
AA7
E
347 360Right-handed alpha
Helix 8
AA8
E
385 393Right-handed alpha
Helix 9
AA9
I
309 321Right-handed alpha
Helix 10
AB1
I
328 339Right-handed alpha
Helix 11
AB2
I
347 360Right-handed alpha
Helix 12
AB3
I
385 393Right-handed alpha
Helix 13
AB4
J
309 321Right-handed alpha
Helix 14
AB5
J
328 339Right-handed alpha
Helix 15
AB6
J
347 360Right-handed alpha
Helix 16
AB7
J
385 393Right-handed alpha
Helix 17
AB8
B
209 220Right-handed alpha
Helix 18
AB9
B
221 224Right-handed 310
Helix 19
AC1
B
232 235Right-handed 310
Helix 20
AC2
B
242 253Right-handed alpha
Helix 21
AC3
B
260 275Right-handed alpha
Helix 22
AC4
H
209 220Right-handed alpha
Helix 23
AC5
H
221 224Right-handed 310
Helix 24
AC6
H
232 235Right-handed 310
Helix 25
AC7
H
242 253Right-handed alpha
Helix 26
AC8
H
260 275Right-handed alpha
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There are 6 sheets in PDB entry 8BZM. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
326 327first strand
Strand 2
A
378 381anti-parallel
Strand 3
A
363 366anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
326 327first strand
Strand 2
E
378 381anti-parallel
Strand 3
E
363 366anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
326 327first strand
Strand 2
I
378 381anti-parallel
Strand 3
I
363 366anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
326 327first strand
Strand 2
J
378 381anti-parallel
Strand 3
J
363 366anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
228 230first strand
Strand 2
B
237 240anti-parallel
Strand 3
B
286 288anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
228 230first strand
Strand 2
H
237 240anti-parallel
Strand 3
H
286 288anti-parallel
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