Analysis of interatomic Contacts of Structural Units in PDB entry:
8C0N

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8C0N entry

There are 8 chains in PDB entry 8C0N (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 7	PHE 66
A	SER 70	LEU 228
B	GLU 7	PHE 66
B	SER 70	LEU 228
C	LEU 8	PHE 66
C	SER 70	LEU 228
D	LEU 8	PHE 66
D	SER 70	LEU 228

There are 12 helices in PDB entry 8C0N. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	58	62	Right-handed 310
Helix 2	AA2	A	82	87	Right-handed alpha
Helix 3	AA3	A	187	191	Right-handed 310
Helix 4	AA4	B	58	62	Right-handed 310
Helix 5	AA5	B	82	87	Right-handed alpha
Helix 6	AA6	B	187	191	Right-handed 310
Helix 7	AA7	C	58	62	Right-handed 310
Helix 8	AA8	C	82	87	Right-handed alpha
Helix 9	AA9	C	187	191	Right-handed 310
Helix 10	AB1	D	58	62	Right-handed 310
Helix 11	AB2	D	82	87	Right-handed alpha
Helix 12	AB3	D	187	191	Right-handed 310

There are 8 sheets in PDB entry 8C0N. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 11 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	75	76	first strand
Strand 2	A	214	224	parallel
Strand 3	A	42	51	anti-parallel
Strand 4	A	26	37	anti-parallel
Strand 5	A	13	23	anti-parallel
Strand 6	A	118	128	parallel
Strand 7	A	105	115	anti-parallel
Strand 8	A	92	100	anti-parallel
Strand 9	A	173	184	anti-parallel
Strand 10	A	157	168	anti-parallel
Strand 11	A	141	144	anti-parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	75	76	first strand
Strand 2	A	214	224	parallel
Strand 3	A	197	209	anti-parallel
Strand 4	A	147	154	anti-parallel
Strand 5	A	157	168	anti-parallel
Strand 6	A	141	144	anti-parallel

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There are 11 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	75	76	first strand
Strand 2	B	214	224	parallel
Strand 3	B	42	51	anti-parallel
Strand 4	B	26	37	anti-parallel
Strand 5	B	13	23	anti-parallel
Strand 6	B	118	128	parallel
Strand 7	B	105	115	anti-parallel
Strand 8	B	92	100	anti-parallel
Strand 9	B	173	184	anti-parallel
Strand 10	B	157	168	anti-parallel
Strand 11	B	141	144	anti-parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	75	76	first strand
Strand 2	B	214	224	parallel
Strand 3	B	197	209	anti-parallel
Strand 4	B	147	154	anti-parallel
Strand 5	B	157	168	anti-parallel
Strand 6	B	141	144	anti-parallel

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There are 11 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	75	76	first strand
Strand 2	C	214	224	parallel
Strand 3	C	42	51	anti-parallel
Strand 4	C	26	37	anti-parallel
Strand 5	C	13	23	anti-parallel
Strand 6	C	118	128	parallel
Strand 7	C	105	115	anti-parallel
Strand 8	C	92	100	anti-parallel
Strand 9	C	173	184	anti-parallel
Strand 10	C	157	168	anti-parallel
Strand 11	C	141	144	anti-parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	75	76	first strand
Strand 2	C	214	224	parallel
Strand 3	C	197	209	anti-parallel
Strand 4	C	147	154	anti-parallel
Strand 5	C	157	168	anti-parallel
Strand 6	C	141	144	anti-parallel

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There are 11 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	75	76	first strand
Strand 2	D	214	224	parallel
Strand 3	D	42	51	anti-parallel
Strand 4	D	26	37	anti-parallel
Strand 5	D	13	23	anti-parallel
Strand 6	D	118	128	parallel
Strand 7	D	105	115	anti-parallel
Strand 8	D	92	100	anti-parallel
Strand 9	D	173	184	anti-parallel
Strand 10	D	157	168	anti-parallel
Strand 11	D	141	144	anti-parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	75	76	first strand
Strand 2	D	214	224	parallel
Strand 3	D	197	209	anti-parallel
Strand 4	D	147	154	anti-parallel
Strand 5	D	157	168	anti-parallel
Strand 6	D	141	144	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8C0N

Analysis of interatomic Contacts of Structural Units in PDB entry:
8C0N