Analysis of interatomic Contacts of Structural Units in PDB entry:
8C1U


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8C1U entry

There is 1 chain in PDB entry 8C1U (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 5VAL 504
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 8C1U. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
21 34Right-handed alpha
Helix 2
AA2
A
47 53Right-handed 310
Helix 3
AA3
A
57 77Right-handed alpha
Helix 4
AA4
A
88 100Right-handed alpha
Helix 5
AA5
A
112 129Right-handed alpha
Helix 6
AA6
A
143 151Right-handed alpha
Helix 7
AA7
A
158 167Right-handed alpha
Helix 8
AA8
A
190 195Right-handed alpha
Helix 9
AA9
A
204 209Right-handed alpha
Helix 10
AB1
A
211 215Right-handed 310
Helix 11
AB2
A
223 235Right-handed alpha
Helix 12
AB3
A
237 243Right-handed alpha
Helix 13
AB4
A
245 249Right-handed 310
Helix 14
AB5
A
261 267Right-handed alpha
Helix 15
AB6
A
271 286Right-handed alpha
Helix 16
AB7
A
295 312Right-handed alpha
Helix 17
AB8
A
333 342Right-handed alpha
Helix 18
AB9
A
347 361Right-handed alpha
Helix 19
AC1
A
364 376Right-handed alpha
Helix 20
AC2
A
383 395Right-handed alpha
Helix 21
AC3
A
399 411Right-handed alpha
Helix 22
AC4
A
427 432Right-handed 310
Helix 23
AC5
A
436 443Right-handed alpha
Helix 24
AC6
A
444 447Right-handed 310
Helix 25
AC7
A
456 460Right-handed 310
Helix 26
AC8
A
461 468Right-handed alpha
Helix 27
AC9
A
482 504Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 8C1U.

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
83 86first strand
Strand 2
A
38 46parallel
Strand 3
A
6 12parallel
Strand 4
A
102 108parallel
Strand 5
A
132 136parallel
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