Analysis of interatomic Contacts of Structural Units in PDB entry:
8C44


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8C44 entry

There are 2 chains in PDB entry 8C44 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 503TYR 1203
C
 GLN 9HIS 176
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 8C44. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
571 594Right-handed alpha
Helix 2
AA2
A
606 631Right-handed alpha
Helix 3
AA3
A
646 660Right-handed alpha
Helix 4
AA4
A
664 683Right-handed alpha
Helix 5
AA5
A
694 715Right-handed alpha
Helix 6
AA6
A
743 763Right-handed alpha
Helix 7
AA7
A
764 769Right-handed alpha
Helix 8
AA8
A
771 775Right-handed 310
Helix 9
AA9
A
842 847Right-handed alpha
Helix 10
AB1
A
869 892Right-handed alpha
Helix 11
AB2
A
904 924Right-handed alpha
Helix 12
AB3
A
931 950Right-handed alpha
Helix 13
AB4
A
971 982Right-handed alpha
Helix 14
AB5
A
983 990Right-handed alpha
Helix 15
AB6
A
1002 1006Right-handed 310
Helix 16
AB7
A
1008 1012Right-handed 310
Helix 17
AB8
A
1013 1035Right-handed alpha
Helix 18
AB9
A
1069 1096Right-handed alpha
Helix 19
AC1
A
1113 1125Right-handed alpha
Helix 20
AC2
A
1161 1170Right-handed alpha
Helix 21
AC3
C
58 87Right-handed alpha
Helix 22
AC4
C
128 131Right-handed 310
Helix 23
AC5
C
141 154Right-handed alpha
Helix 24
AC6
C
154 159Right-handed alpha
Helix 25
AC7
C
159 167Right-handed alpha
Helix 26
AC8
C
167 176Right-handed alpha
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There are 3 sheets in PDB entry 8C44. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
504 506first strand
Strand 2
A
540 542anti-parallel
Strand 3
A
552 554anti-parallel
Strand 4
A
568 570anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
826 828first strand
Strand 2
A
839 841anti-parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
49 52first strand
Strand 2
C
36 44anti-parallel
Strand 3
C
24 33anti-parallel
Strand 4
C
10 21anti-parallel
Strand 5
C
93 102anti-parallel
Strand 6
C
111 118anti-parallel
Strand 7
C
121 127anti-parallel
Strand 8
C
132 135anti-parallel
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