Analysis of interatomic Contacts of Structural Units in PDB entry:
8C4A


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8C4A entry

There is 1 chain in PDB entry 8C4A (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
LYS 7PRO 2504
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are169 helices in PDB entry 8C4A. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
12 24Right-handed alpha
Helix 2
AA2
A
27 42Right-handed alpha
Helix 3
AA3
A
48 59Right-handed alpha
Helix 4
AA4
A
61 72Right-handed alpha
Helix 5
AA5
A
75 96Right-handed alpha
Helix 6
AA6
A
98 118Right-handed alpha
Helix 7
AA7
A
123 141Right-handed alpha
Helix 8
AA8
A
145 150Right-handed alpha
Helix 9
AA9
A
151 156Right-handed alpha
Helix 10
AB1
A
163 178Right-handed alpha
Helix 11
AB2
A
180 190Right-handed alpha
Helix 12
AB3
A
192 203Right-handed alpha
Helix 13
AB4
A
207 226Right-handed alpha
Helix 14
AB5
A
233 245Right-handed alpha
Helix 15
AB6
A
248 261Right-handed alpha
Helix 16
AB7
A
264 277Right-handed alpha
Helix 17
AB8
A
284 297Right-handed alpha
Helix 18
AB9
A
298 300Right-handed 310
Helix 19
AC1
A
301 308Right-handed alpha
Helix 20
AC2
A
310 318Right-handed alpha
Helix 21
AC3
A
321 328Right-handed alpha
Helix 22
AC4
A
328 347Right-handed alpha
Helix 23
AC5
A
349 359Right-handed alpha
Helix 24
AC6
A
360 372Right-handed alpha
Helix 25
AC7
A
375 391Right-handed alpha
Helix 26
AC8
A
392 402Right-handed alpha
Helix 27
AC9
A
403 415Right-handed alpha
Helix 28
AD1
A
418 433Right-handed alpha
Helix 29
AD2
A
435 445Right-handed alpha
Helix 30
AD3
A
448 455Right-handed alpha
Helix 31
AD4
A
461 473Right-handed alpha
Helix 32
AD5
A
474 479Right-handed 310
Helix 33
AD6
A
484 489Right-handed alpha
Helix 34
AD7
A
490 501Right-handed alpha
Helix 35
AD8
A
504 519Right-handed alpha
Helix 36
AD9
A
520 523Right-handed 310
Helix 37
AE1
A
524 529Right-handed alpha
Helix 38
AE2
A
531 544Right-handed alpha
Helix 39
AE3
A
547 562Right-handed alpha
Helix 40
AE4
A
563 572Right-handed alpha
Helix 41
AE5
A
573 580Right-handed alpha
Helix 42
AE6
A
584 599Right-handed alpha
Helix 43
AE7
A
601 612Right-handed alpha
Helix 44
AE8
A
612 626Right-handed alpha
Helix 45
AE9
A
632 651Right-handed alpha
Helix 46
AF1
A
655 667Right-handed alpha
Helix 47
AF2
A
670 676Right-handed alpha
Helix 48
AF3
A
683 698Right-handed alpha
Helix 49
AF4
A
703 721Right-handed alpha
Helix 50
AF5
A
724 740Right-handed alpha
Helix 51
AF6
A
745 753Right-handed alpha
Helix 52
AF7
A
754 766Right-handed alpha
Helix 53
AF8
A
769 785Right-handed alpha
Helix 54
AF9
A
789 797Right-handed alpha
Helix 55
AG1
A
798 808Right-handed alpha
Helix 56
AG2
A
813 819Right-handed alpha
Helix 57
AG3
A
821 826Right-handed alpha
Helix 58
AG4
A
830 850Right-handed alpha
Helix 59
AG5
A
852 865Right-handed alpha
Helix 60
AG6
A
869 879Right-handed alpha
Helix 61
AG7
A
880 894Right-handed alpha
Helix 62
AG8
A
895 902Right-handed alpha
Helix 63
AG9
A
909 928Right-handed alpha
Helix 64
AH1
A
930 940Right-handed alpha
Helix 65
AH2
A
941 952Right-handed alpha
Helix 66
AH3
A
960 979Right-handed alpha
Helix 67
AH4
A
979 986Right-handed alpha
Helix 68
AH5
A
988 1002Right-handed alpha
Helix 69
AH6
A
1005 1020Right-handed alpha
Helix 70
AH7
A
1022 1030Right-handed alpha
Helix 71
AH8
A
1032 1049Right-handed alpha
Helix 72
AH9
A
1051 1070Right-handed alpha
Helix 73
AI1
A
1071 1081Right-handed alpha
Helix 74
AI2
A
1082 1094Right-handed alpha
Helix 75
AI3
A
1097 1113Right-handed alpha
Helix 76
AI4
A
1116 1122Right-handed 310
Helix 77
AI5
A
1125 1139Right-handed alpha
Helix 78
AI6
A
1142 1157Right-handed alpha
Helix 79
AI7
A
1158 1160Right-handed 310
Helix 80
AI8
A
1161 1168Right-handed alpha
Helix 81
AI9
A
1169 1181Right-handed alpha
Helix 82
AJ1
A
1184 1197Right-handed alpha
Helix 83
AJ2
A
1199 1218Right-handed alpha
Helix 84
AJ3
A
1221 1237Right-handed alpha
Helix 85
AJ4
A
1243 1248Right-handed alpha
Helix 86
AJ5
A
1250 1265Right-handed alpha
Helix 87
AJ6
A
1268 1285Right-handed alpha
Helix 88
AJ7
A
1295 1302Right-handed alpha
Helix 89
AJ8
A
1303 1314Right-handed alpha
Helix 90
AJ9
A
1320 1337Right-handed alpha
Helix 91
AK1
A
1340 1362Right-handed alpha
Helix 92
AK2
A
1365 1380Right-handed alpha
Helix 93
AK3
A
1382 1391Right-handed alpha
Helix 94
AK4
A
1399 1411Right-handed alpha
Helix 95
AK5
A
1414 1435Right-handed alpha
Helix 96
AK6
A
1440 1445Right-handed alpha
Helix 97
AK7
A
1446 1455Right-handed alpha
Helix 98
AK8
A
1461 1478Right-handed alpha
Helix 99
AK9
A
1481 1489Right-handed alpha
Helix 100
AL1
A
1489 1505Right-handed alpha
Helix 101
AL2
A
1508 1529Right-handed alpha
Helix 102
AL3
A
1534 1538Right-handed 310
Helix 103
AL4
A
1540 1552Right-handed alpha
Helix 104
AL5
A
1554 1572Right-handed alpha
Helix 105
AL6
A
1572 1583Right-handed alpha
Helix 106
AL7
A
1583 1591Right-handed alpha
Helix 107
AL8
A
1591 1598Right-handed alpha
Helix 108
AL9
A
1598 1613Right-handed alpha
Helix 109
AM1
A
1617 1624Right-handed alpha
Helix 110
AM2
A
1627 1643Right-handed alpha
Helix 111
AM3
A
1643 1663Right-handed alpha
Helix 112
AM4
A
1670 1684Right-handed alpha
Helix 113
AM5
A
1689 1693Right-handed 310
Helix 114
AM6
A
1694 1711Right-handed alpha
Helix 115
AM7
A
1719 1736Right-handed alpha
Helix 116
AM8
A
1738 1740Right-handed 310
Helix 117
AM9
A
1741 1747Right-handed alpha
Helix 118
AN1
A
1749 1761Right-handed alpha
Helix 119
AN2
A
1763 1778Right-handed alpha
Helix 120
AN3
A
1780 1790Right-handed alpha
Helix 121
AN4
A
1792 1807Right-handed alpha
Helix 122
AN5
A
1810 1829Right-handed alpha
Helix 123
AN6
A
1839 1853Right-handed alpha
Helix 124
AN7
A
1857 1872Right-handed alpha
Helix 125
AN8
A
1873 1875Right-handed 310
Helix 126
AN9
A
1876 1883Right-handed alpha
Helix 127
AO1
A
1884 1895Right-handed alpha
Helix 128
AO2
A
1902 1914Right-handed alpha
Helix 129
AO3
A
1916 1926Right-handed alpha
Helix 130
AO4
A
1927 1940Right-handed alpha
Helix 131
AO5
A
1945 1961Right-handed alpha
Helix 132
AO6
A
1963 1973Right-handed alpha
Helix 133
AO7
A
1974 1987Right-handed alpha
Helix 134
AO8
A
1989 2005Right-handed alpha
Helix 135
AO9
A
2007 2018Right-handed alpha
Helix 136
AP1
A
2018 2028Right-handed alpha
Helix 137
AP2
A
2035 2054Right-handed alpha
Helix 138
AP3
A
2055 2057Right-handed 310
Helix 139
AP4
A
2058 2066Right-handed alpha
Helix 140
AP5
A
2066 2078Right-handed alpha
Helix 141
AP6
A
2083 2098Right-handed alpha
Helix 142
AP7
A
2102 2109Right-handed alpha
Helix 143
AP8
A
2112 2122Right-handed alpha
Helix 144
AP9
A
2126 2141Right-handed alpha
Helix 145
AQ1
A
2143 2153Right-handed alpha
Helix 146
AQ2
A
2154 2166Right-handed alpha
Helix 147
AQ3
A
2169 2182Right-handed alpha
Helix 148
AQ4
A
2183 2185Right-handed 310
Helix 149
AQ5
A
2189 2196Right-handed alpha
Helix 150
AQ6
A
2198 2205Right-handed alpha
Helix 151
AQ7
A
2215 2221Right-handed alpha
Helix 152
AQ8
A
2222 2230Right-handed alpha
Helix 153
AQ9
A
2232 2241Right-handed alpha
Helix 154
AR1
A
2243 2255Right-handed alpha
Helix 155
AR2
A
2258 2277Right-handed alpha
Helix 156
AR3
A
2279 2301Right-handed alpha
Helix 157
AR4
A
2328 2337Right-handed alpha
Helix 158
AR5
A
2338 2343Right-handed alpha
Helix 159
AR6
A
2346 2363Right-handed alpha
Helix 160
AR7
A
2364 2367Right-handed 310
Helix 161
AR8
A
2369 2386Right-handed alpha
Helix 162
AR9
A
2389 2396Right-handed alpha
Helix 163
AS1
A
2397 2409Right-handed alpha
Helix 164
AS2
A
2412 2428Right-handed alpha
Helix 165
AS3
A
2430 2438Right-handed alpha
Helix 166
AS4
A
2439 2452Right-handed alpha
Helix 167
AS5
A
2457 2476Right-handed alpha
Helix 168
AS6
A
2479 2484Right-handed alpha
Helix 169
AS7
A
2492 2497Right-handed 310
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There are no sheets in PDB entry 8C4A

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