Analysis of interatomic Contacts of Structural Units in PDB entry:
8C66


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8C66 entry

There are 4 chains in PDB entry 8C66 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 24ASN 192
B
 ALA 24ASN 192
C
 ALA 24ASN 192
D
 ALA 24TYR 144
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 8C66. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
29 33Right-handed 310
Helix 2
AA2
A
120 126Right-handed alpha
Helix 3
AA3
A
127 131Right-handed 310
Helix 4
AA4
A
133 136Right-handed 310
Helix 5
AA5
A
137 148Right-handed alpha
Helix 6
AA6
A
179 183Right-handed 310
Helix 7
AA7
A
186 190Right-handed 310
Helix 8
AA8
B
29 33Right-handed 310
Helix 9
AA9
B
120 126Right-handed alpha
Helix 10
AB1
B
127 131Right-handed 310
Helix 11
AB2
B
133 136Right-handed 310
Helix 12
AB3
B
137 148Right-handed alpha
Helix 13
AB4
B
179 183Right-handed 310
Helix 14
AB5
B
186 190Right-handed 310
Helix 15
AB6
C
29 33Right-handed 310
Helix 16
AB7
C
120 126Right-handed alpha
Helix 17
AB8
C
127 131Right-handed 310
Helix 18
AB9
C
133 136Right-handed 310
Helix 19
AC1
C
137 148Right-handed alpha
Helix 20
AC2
C
179 183Right-handed 310
Helix 21
AC3
C
186 190Right-handed 310
Helix 22
AC4
D
29 33Right-handed 310
Helix 23
AC5
D
120 126Right-handed alpha
Helix 24
AC6
D
127 131Right-handed 310
Helix 25
AC7
D
133 136Right-handed 310
Helix 26
AC8
D
137 148Right-handed alpha
Helix 27
AC9
D
179 183Right-handed 310
Helix 28
AD1
D
186 190Right-handed 310
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There are 4 sheets in PDB entry 8C66. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
74 79first strand
Strand 2
A
60 65anti-parallel
Strand 3
A
50 57anti-parallel
Strand 4
A
39 45anti-parallel
Strand 5
A
154 167anti-parallel
Strand 6
A
112 119anti-parallel
Strand 7
A
101 107anti-parallel
Strand 8
A
89 95anti-parallel
Strand 9
A
81 84anti-parallel
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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
74 79first strand
Strand 2
B
60 65anti-parallel
Strand 3
B
50 57anti-parallel
Strand 4
B
39 45anti-parallel
Strand 5
B
154 167anti-parallel
Strand 6
B
112 119anti-parallel
Strand 7
B
101 107anti-parallel
Strand 8
B
89 95anti-parallel
Strand 9
B
81 86anti-parallel
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There are 9 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
74 79first strand
Strand 2
C
60 65anti-parallel
Strand 3
C
50 57anti-parallel
Strand 4
C
39 45anti-parallel
Strand 5
C
154 167anti-parallel
Strand 6
C
112 119anti-parallel
Strand 7
C
101 107anti-parallel
Strand 8
C
89 95anti-parallel
Strand 9
C
81 84anti-parallel
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There are 9 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
74 79first strand
Strand 2
D
60 65anti-parallel
Strand 3
D
50 57anti-parallel
Strand 4
D
39 45anti-parallel
Strand 5
D
154 167anti-parallel
Strand 6
D
112 119anti-parallel
Strand 7
D
101 107anti-parallel
Strand 8
D
89 95anti-parallel
Strand 9
D
81 84anti-parallel
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